Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq86 461 7e-125
seq577 122 8e-23
seq2100 98.7 9e-16
>seq86
Length=659436
Score = 461 bits (510), Expect = 7e-125
Identities = 1030/1539 (67%), Gaps = 29/1539 (2%)
Strand=Plus/Minus
Query 22409 TCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAAC 22468
|||||||||| ||| | |||| || |||| || ||| |||| || | || |||
Sbjct 245784 TCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAAC 245725
Query 22469 TCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTG 22528
|| ||||||| || | ||| ||| |||||| ||| ||| |||| || || |||
Sbjct 245724 TCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTG 245665
Query 22529 TTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTC 22588
|| ||||| ||||| ||||| || || || ||||| ||||||| ||| || ||| |||
Sbjct 245664 TTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTC 245605
Query 22589 AAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTC 22648
| |||||| || | || || ||| |||| | |||||||||||| |||| |||||||
Sbjct 245604 ACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTC 245545
Query 22649 ACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGC-TGCCTTCGTACGT 22707
|| |||||||| ||||| || | | ||| ||| | ||||| ||| ||||| ||
Sbjct 245544 ---TTCTCCCACATGTCGTACTGGAGGATGCCCTTACT-GACGGGCGAGCCCTCGTATGT 245489
Query 22708 TTCGTACGGACC-ATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATA 22766
||||| || || | | | ||||| ||||||||||| ||||||| ||| ||| || |
Sbjct 245488 CTCGTAGGGGCCGAGCTCT-GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGA 245430
Query 22767 TAGTCTCGAAGATTTTCTTGTTCAATTCGGC--GGCGGCGACGCTTTCGTACGGCATACG 22824
| ||||||||||| | |||| | | || ||| || ||||||| |||| ||
Sbjct 245429 TGGTCTCGAAGATCTGGATGTTGA--GCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCG 245372
Query 22825 CATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAG 22884
||||| | ||| || || |||| |||||| ||||| || |||||||| | || |
Sbjct 245371 CATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTT 245312
Query 22885 ATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTT 22944
|| ||| | || ||||| | || || | || ||||| | |||| | |||
Sbjct 245311 GTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTT 245252
Query 22945 TCTGGTCACAATT---TTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001
| |||| ||| || || | | |||||| || | | | |
Sbjct 245251 T---TTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGG 245195
Query 23002 TACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA 23061
|| || |||||| |||||| ||||| || ||||| |||||||||||||| |||
Sbjct 245194 CGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCT 245135
Query 23062 CGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTG 23121
|||||||| || | || || || || ||||| || || || ||||||| || |||
Sbjct 245134 GGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTG 245075
Query 23122 GTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTG 23181
|||||| || | ||||| | ||||||||||||||||| ||||| || || ||| |||
Sbjct 245074 GTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTG 245015
Query 23182 CGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGT--ACCTGCCT 23239
||||||||||| || ||| | ||| || | ||| | | | | ||| |||
Sbjct 245014 GGACTCGATGATGGCGTACCAGAGCTGCTGCGCCT--TCACCACCCTCTTCACCCTCCCT 244957
Query 23240 TCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCG 23299
|| | ||| || | ||| | | || || || | || | || ||| |||| |||
Sbjct 244956 TCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCG 244897
Query 23300 GGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAA 23359
|| | | | |||||||| | ||| || | || || | |||| ||
Sbjct 244896 GGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAAC 244837
Query 23360 AGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTG 23419
|| ||||| ||||| | |||||||| || || | ||| | | |||||| || || |||
Sbjct 244836 AGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG 244777
Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479
||||| |||| |||| ||||| |||||||| |||||||| || ||||| | |||
Sbjct 244776 TTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCG 244717
Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539
|| || || |||||||| ||||||||||| |||||||| || |||||||||||||| |||
Sbjct 244716 AAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACT 244657
Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTT-- 23597
|| |||||||| || | |||||||| |||| ||| || | | | |||
Sbjct 244656 CTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCAGCGA----TGTAGCTTCC 244601
Query 23598 --TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGC 23655
| | ||| | | | || | || || || || | || || || || | |||
Sbjct 244600 CGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGC 244541
Query 23656 GCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAA 23715
||| || ||||| |||||||||||||| ||||||||||| || || | | || || |||
Sbjct 244540 GCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAA 244481
Query 23716 ACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGT 23775
|| |||| |||| | || |||| ||| || ||||| |||||| ||
Sbjct 244480 GCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGT 244421
Query 23776 AAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTG 23835
|| | | ||||| || ||||| || |||||||| || || ||||| |||||
Sbjct 244420 GAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCGATGTCTCGCCCGTG 244361
Query 23836 TATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAAT 23895
|| || | | || | ||| | ||||| || || | |||| || ||||| ||
Sbjct 244360 GATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGAT 244301
Query 23896 TTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
|| | ||| || || || | || || || || || ||
Sbjct 244300 CTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAA 244262
>seq577
Length=410616
Score = 122 bits (134), Expect = 8e-23
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106
|||||| ||||| ||||| || || || || || || |||||||| |||| || ||
Sbjct 151926 CACCTCATCTTTACTTGTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGT 151985
Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166
||||| ||| ||||||| | || | ||||| | |||||||||||||||||||||||
Sbjct 151986 GCCCAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGT 152045
Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGC 23196
|||||||| ||||||||||||||| ||
Sbjct 152046 ACCCGTCTCTGTCTGCGACTCGATGATGGC 152075
Score = 114 bits (126), Expect = 1e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399
|||| || || ||||||| || || || ||||| | || ||||||| || | ||| |
Sbjct 152394 TTTCCACTCGCTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTC 152453
Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| ||| ||||| || |||||||| |||| |||||||| || |||||||| |||||||
Sbjct 152454 TCTGCTCTTCTTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCC 152513
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495
||||||| ||||| || | || || || |||||||
Sbjct 152514 ACGGCTCCAGGTACACAGAGAAGGCCCCTGGTCTCT 152549
>seq2100
Length=111253
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||||||||| || || || ||||| || || |||||||| |||||| | || || || |
Sbjct 23847 CAAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGC 23788
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||| | || | ||||| | ||| ||| ||||| ||| | || || |
Sbjct 23787 CCAGCGACACCATTGAGAACGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTG 23728
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||||||| | || || || ||||| || ||| ||||||| || || || |
Sbjct 23727 ACCAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACT 23668
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| || || ||||||||||| || || || || || || | |||||||| ||
Sbjct 23667 ACAATATCCAAAAAGAATCCACCCTCCACCTTGTTCTCCGTCTGAGGGGTGG 23616
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || |||||||| |||||| | || ||||| ||
Sbjct 27577 CATGCAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGAGCCCAG 27518
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| | || ||| ||||| ||| | || || |||||
Sbjct 27517 TGACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 27458
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || || || ||| ||||||| || | || || ||
Sbjct 27457 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAA 27398
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| ||||||||||| || || || || || || | |||||||| ||
Sbjct 27397 CATCCAAAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGG 27350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445666169424960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |