Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq86 416 4e-111
seq577 107 3e-18
>seq86
Length=659436
Score = 416 bits (460), Expect = 4e-111
Identities = 1287/1978 (65%), Gaps = 29/1978 (1%)
Strand=Plus/Minus
Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146
|||||||||||| | ||| || | | | ||||| ||||| || ||||| | |
Sbjct 245827 CTGAATGGATCCGTTGTTTGCAATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCGCG 245768
Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206
||| || | | | ||||| || || || || | || || ||||| |||| || ||
Sbjct 245767 CTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCT 245708
Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266
|| ||||| || || ||||| |||| || | ||||| || || |||| || || ||
Sbjct 245707 GCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 245648
Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 65326
|| || || || ||||| || |||| || | || || || | |||| | | |||
Sbjct 245647 GGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGAT 245588
Query 65327 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 65386
|| || || || | | ||| | ||| || || | ||| | |
Sbjct 245587 CTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGG--CGTCTTCTCCCACATGTCG 245530
Query 65387 T--TGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTC 65444
| || || || || |||||| || ||| || | ||||| ||||| || || ||
Sbjct 245529 TACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCT 245470
Query 65445 TCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTA 65504
| || ||||| || || ||||| | || ||| || ||||| |||||||||| |
Sbjct 245469 GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATG 245410
Query 65505 TTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 65564
|| || || ||||| |||| || || |||| | || || || || || ||
Sbjct 245409 TTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCC 245350
Query 65565 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 65624
| || || || || || ||||| || || || | ||| || || | || ||||| ||
Sbjct 245349 AGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGG 245290
Query 65625 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACA 65684
| || || || || || || || || || ||||| ||| | || ||||| ||| ||
Sbjct 245289 ACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACG 245230
Query 65685 TCCTTCAGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACA 65741
||| || || || || ||||| | || ||||||| | || |
Sbjct 245229 GAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGGCGTGACGTACATGTTGAGGGCGATG 245170
Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGC 65799
|| ||||| || || ||||| ||||| | | | | | || | | | ||| ||||
Sbjct 245169 GAGGCCAGGTTGCAGACGGCCACCTCGTC--CTTGCTGGTGTACTCCACCACCTCTGTGC 245112
Query 65800 AAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCAT 65859
| || || || || |||||||| || | || || || || ||||| |||| || || |
Sbjct 245111 AGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGT 245052
Query 65860 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 65919
|||| || || ||| | || || || ||||| |||| || || || || || | |||||
Sbjct 245051 CCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGA 244992
Query 65920 -CGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATA--GTGTATACA 65976
| || | ||||| | | || ||| ||| | || ||| ||||| |
Sbjct 244991 GCTGCT-GCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGC 244933
Query 65977 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 66036
|| |||||||| |||||||| | ||||| || ||||| || ||||||||||
Sbjct 244932 TTC--TCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCA 244875
Query 66037 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 66095
| ||||| || || || ||||| ||||| || || || || ||||| | || |
Sbjct 244874 AGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGT 244815
Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155
| ||| | ||||||| ||| || ||||| |||||||| ||||| || || || |||||
Sbjct 244814 AGAAA-AGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAG 244756
Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215
| | | || | ||||||||||||| ||| ||||| | | || || | |||||
Sbjct 244755 TCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTG 244696
Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275
|| ||||| || | ||| | ||| ||||| || |||||||||| ||| || | | ||
Sbjct 244695 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 244636
Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335
||||| | || ||||| || | ||| |||||||| | | || || || | |
Sbjct 244635 TTGGAGTTGCCGTTGGTGCCAGCGATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCC 244576
Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395
| || || || || || || || || | ||||| | || | || || ||||||
Sbjct 244575 ACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATG 244516
Query 66396 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 66455
|| || || || || ||| ||||| | || || || ||||| |||| || | || |
Sbjct 244515 CCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTG 244456
Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515
|| || || || || | ||| ||||| ||||| || ||||| || || || || || |||
Sbjct 244455 GTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTG 244396
Query 66516 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 66575
|| ||||| || || | ||| || || | || || || || | || | ||| | |
Sbjct 244395 TAGGTCTCGATGGCAGCGTCGATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGC 244336
Query 66576 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 66635
|||||||| || | || | | || ||| || |||| || |||||| |||| |
Sbjct 244335 ATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGA 244276
Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695
|| || ||||| || ||||||| || || |||| || ||||| || || || ||
Sbjct 244275 GTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTCTGTCATAAATGATGGAGGAATTAAGG 244216
Query 66696 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATGTTT 66754
||||| | || | || | || | || | ||| || || || ||||| ||
Sbjct 244215 CGGTCCTTGTTTTCCATGACGATGTCGAGCGT-CTCCTTGGAGATCATGGGAGAGTG--- 244160
Query 66755 CCCATTTTT---AGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 66811
|| || || ||| ||||| ||| ||| | || |||||||| || || || | ||
Sbjct 244159 CCGTTTGTTCAGAGGGTTGACGTAGGCGAACAGGTCTTCCATCACCTCGCTGAACACCTT 244100
Query 66812 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGG 66871
|| || || ||||| || || || ||||| || || ||||| | ||||| || || ||
Sbjct 244099 CTTGGTCTCCTTGTGCAGGTTGGAGACGGCAATCCTCGCGGCCAGGATGGCGTAGTCGGG 244040
Query 66872 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 66931
|||| || || ||||| || || || || || || ||||| | || || || ||
Sbjct 244039 GTGTTTGGTCGTCAGGGTGGCCGCGATCTCCGCCGCTAGCGTGTCTAGCTCCACGGTGGT 243980
Query 66932 TACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATC 66991
|| || | || | || ||||| |||||||| | || | | ||||| | | ||
Sbjct 243979 GACGCCGCTGTACAAGCCCTGGATCACCTTCATGGTGATCTGAGCCGGATCCACAAAGTC 243920
Query 66992 AGTGTTTAAGCCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGAC 67048
| ||| | ||| || || || |||| || || || ||||||||||| ||||||||
Sbjct 243919 CGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGAC 243863
Score = 93.3 bits (102), Expect = 6e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
|||| ||||| || ||||| || || ||||| || |||| || || || ||||| |
Sbjct 246090 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTCGGCTCAGCGATGTGGATGT 246031
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| || || || || |||||||||||||| | |||||| ||||| | | | ||||
Sbjct 246030 TCAGCGACTGGCTCTGGTCGATGAAGGCTCCACGGTCTGCCGCCATCCTCAGCACGGTCT 245971
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 65074
| || | |||||||||| |||||||| | |||| | || |||||
Sbjct 245970 TCTGGGAGATTTCCCAAACGGTTTTATACAGCTGCTTCAGGTCCTCTGG 245922
>seq577
Length=410616
Score = 107 bits (118), Expect = 3e-18
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
||||||||||||| ||||| || || |||||| || | || || || || || || |
Sbjct 149108 TCCATCCGTAAAAGTGCATGCTGGTGAGTTTGCCGTAGTTTGGCTCAGCGATGTGAATGT 149167
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| ||| ||||| ||||||||| ||| || | ||||| ||||| || | || || |
Sbjct 149168 TCAGAGACTGACTCTGATCGATGTAGGTGCCACGATCTGCTGCCATCTTCAGGACGGTTT 149227
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 65074
| || | |||||||||| |||||||| | |||| | |||||||||
Sbjct 149228 TCTGGGAGATTTCCCAAACTGTTTTATAGAGCTGCTTCAGATCTTCTGG 149276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658024809845920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |