Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq885 174 2e-39
seq148 174 2e-39
seq189 172 9e-39
seq992 168 1e-37
seq1542 163 4e-36
seq561 145 1e-30
>seq885
Length=372024
Score = 174 bits (192), Expect = 2e-39
Identities = 203/274 (74%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 110950 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 111009
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || |||||||||||| |||| || | |||| || ||||
Sbjct 111010 CCGCCGTCTGGCTCGCCGCGGGGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 111069
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 111070 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 111129
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || | || | || ||
Sbjct 111130 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTCAAGAGGCAGGG 111189
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
||| | | || || || ||| ||||| || ||
Sbjct 111190 CCGCACTCTGTACGGCTTCGGAGGTTAAACTGCT 111223
Score = 174 bits (192), Expect = 2e-39
Identities = 203/274 (74%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 120904 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 120845
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| |||||||| ||||||||| |||| || | |||| || ||||
Sbjct 120844 TCGTCGCCTGGCTCGCCGTGGTGGGGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 120785
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 120784 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 120725
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || | || | || ||
Sbjct 120724 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTCAAGAGGCAGGG 120665
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
||| | | || || || ||| ||||| || ||
Sbjct 120664 CCGCACTCTGTACGGCTTCGGAGGTTAAACTGCT 120631
>seq148
Length=500830
Score = 174 bits (192), Expect = 2e-39
Identities = 203/274 (74%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 16565 CGCCAAGCGTCACCGTAAGGTTCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 16506
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || |||||||||||| |||| || | |||| || ||||
Sbjct 16505 CCGCCGTCTGGCTCGCCGCGGGGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 16446
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 16445 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 16386
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || | || | || ||
Sbjct 16385 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTCAAGAGGCAGGG 16326
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
||| | | || || || ||| ||||| || ||
Sbjct 16325 CCGCACTCTGTACGGCTTCGGAGGTTAAACTGCT 16292
>seq189
Length=469626
Score = 172 bits (190), Expect = 9e-39
Identities = 184/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 76060 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 76001
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| || ||||||||||||||| |||| || | |||| || ||||
Sbjct 76000 TCGTCGCCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 75941
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 75940 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 75881
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 75880 GCACGCCAAGAGGAAGACCGTGACCGCCATGGATGTAGTGTACGCTCTCAAGAGGCAGGG 75821
Query 16672 CCG 16674
|||
Sbjct 75820 CCG 75818
Score = 172 bits (190), Expect = 9e-39
Identities = 184/243 (76%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 98906 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 98847
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| || |||||||| || ||||||||||||||| |||| || | |||| || ||||
Sbjct 98846 ACGCCGCCTGGCTCGCCGCGGTGGAGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 98787
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| |||||| || ||| |||||
Sbjct 98786 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 98727
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 98726 GCACGCTAAGAGGAAGACCGTGACCGCCATGGATGTGGTGTACGCTCTCAAGAGGCAGGG 98667
Query 16672 CCG 16674
|||
Sbjct 98666 CCG 98664
Score = 168 bits (186), Expect = 1e-37
Identities = 183/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 65058 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 65117
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| |||||||| ||||||||| |||| || | |||| || ||||
Sbjct 65118 TCGTCGCCTGGCTCGCCGTGGTGGGGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 65177
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||| | ||| ||| |||| |||||| || ||| |||||
Sbjct 65178 CCGCGGTGTGCTCAAGGTCTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 65237
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 65238 GCACGCCAAGAGGAAGACCGTGACCGCCATGGATGTAGTGTACGCTCTCAAGAGGCAGGG 65297
Query 16672 CCG 16674
|||
Sbjct 65298 CCG 65300
Score = 168 bits (186), Expect = 1e-37
Identities = 183/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | | || || ||||||||||| |||||||||||||| |||||
Sbjct 109290 CGCCAAGCGTCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCCGCTAT 109231
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||| |||||||| |||||||| ||||||||| |||| || | |||| || ||||
Sbjct 109230 TCGTCGCCTGGCTCGCCGTGGTGGGGTCAAGCGTATCTCCGGTCTCATCTACGAGGAGAC 109171
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||| | ||| ||| |||| |||||| || ||| |||||
Sbjct 109170 CCGCGGTGTGCTCAAGGTCTTCTTGGAGAACGTCATCCGTGATGCCGTCACCTACACCGA 109111
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| || ||| |||||||| | || || || | || | || ||
Sbjct 109110 GCACGCCAAGAGGAAGACCGTGACCGCCATGGATGTGGTGTACGCTCTCAAGAGGCAGGG 109051
Query 16672 CCG 16674
|||
Sbjct 109050 CCG 109048
>seq992
Length=230319
Score = 168 bits (186), Expect = 1e-37
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 225281 CGCCAAGCGTCACCGTAAGGTTCTCCGCGATAACATCCAGGGAATCACCAAGCCCGCTAT 225340
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || |||||||||||| |||| || | |||| || ||||
Sbjct 225341 CCGCCGTCTGGCTCGCCGCGGGGGAGTCAAGCGTATCTCCGGCCTCATCTACGAGGAGAC 225400
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 225401 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 225460
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || | ||||| |||||| |||||||
Sbjct 225461 GCACGCCAAGAGGAAGACCGTCACCGCCATGGA 225493
Score = 159 bits (176), Expect = 5e-35
Identities = 196/268 (73%), Gaps = 0/268 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| |||||||| || | ||| || ||||||||||| |||||||||||||| |||||
Sbjct 218444 CGCCAAGCGTCACCGTAAGGTTCTCCGCGATAACATCCAGGGAATCACCAAGCCCGCTAT 218503
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || || | |||||| |||| || | |||| || ||||
Sbjct 218504 CCGCCGTCTGGCTCGCCGCGGGGGGGGCAAGCGGATCTCCGGCCTCATCTACGAGGAGAC 218563
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | ||| ||||||| ||| ||| |||| ||| || || ||| |||||
Sbjct 218564 CCGCGGTGTGCTCAAGGTCTTCCTGGAGAACGTCATCCGTGACGCCGTCACCTACACCGA 218623
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| ||||||| | || || || | || | || ||
Sbjct 218624 GCACGCCAAGAGGAAGACCGTCACCGCCATGGACGTGGTGTACGCTCTCAAGAGGCAGGG 218683
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 218684 CCGCACTCTGTACGGCTTCGGAGGTTAA 218711
>seq1542
Length=159976
Score = 163 bits (180), Expect = 4e-36
Identities = 197/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| |||||||||||||| || ||
Sbjct 32321 CGCCAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCGGCCAT 32262
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || ||||||||||| |||| || | |||| || ||||
Sbjct 32261 CCGCCGTCTGGCTCGCCGCGGCGGAGTCAAGCGAATCTCCGGCCTCATCTACGAGGAGAC 32202
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| | ||||| ||| ||| |||| ||| || | || |||||
Sbjct 32201 CCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTTACGTACACCGA 32142
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| |||||||| | || || || |||| | || ||
Sbjct 32141 GCACGCCAAGAGGAAGACCGTCACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 32082
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 32081 CCGCACTCTGTACGGCTTCGGAGGTTAA 32054
Score = 163 bits (180), Expect = 4e-36
Identities = 197/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| |||||||||||||| || ||
Sbjct 55959 CGCCAAGCGCCACCGTAAAGTCCTCCGTGATAACATCCAGGGAATCACCAAGCCGGCCAT 55900
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||||||||| || || ||||||||||| |||| || | |||| || ||||
Sbjct 55899 CCGCCGTCTGGCTCGCCGCGGCGGAGTCAAGCGAATCTCCGGCCTCATCTACGAGGAGAC 55840
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| |||||| | ||||| ||| ||| |||| ||| || | || |||||
Sbjct 55839 CCGCGGTGTGTTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTTACGTACACCGA 55780
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||| |||||||| | || || || |||| | || ||
Sbjct 55779 GCACGCCAAGAGGAAGACCGTCACCGCCATGGATGTGGTGTACGCTCTGAAGAGGCAGGG 55720
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || || || ||| |||||
Sbjct 55719 CCGCACTCTGTACGGCTTCGGAGGTTAA 55692
>seq561
Length=460065
Score = 145 bits (160), Expect = 1e-30
Identities = 178/243 (73%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || || | | || || ||||||||||| || ||||||||||| || ||
Sbjct 446845 CGCCAAGCGGCACCGTAAAGTCCTCCGCGATAACATCCAGGGCATCACCAAGCCCGCCAT 446786
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || |||||||| || || |||||||||||| |||| || || |||| || ||||
Sbjct 446785 CCGCCGCCTGGCTCGCCGCGGCGGAGTCAAGCGTATCTCCGGCCTGATCTACGAGGAGAC 446726
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || |||||| | ||||| ||| ||| |||| ||| || | || || ||
Sbjct 446725 CCGCGGCGTGTTGAAGGTGTTCCTGGAGAACGTGATCCGTGACGCCGTGACGTACACGGA 446666
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | |||||||| ||| ||||||| | || || || |||| | || ||
Sbjct 446665 GCACGCCAAGAGGAAGACTGTGACCGCCATGGACGTGGTGTACGCCCTGAAGAGGCAGGG 446606
Query 16672 CCG 16674
|||
Sbjct 446605 CCG 446603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79058753445684
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