Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq86 269 3e-67 seq577 118 1e-21 seq722 104 2e-17 seq2100 102 8e-17 >seq86 Length=659436 Score = 269 bits (298), Expect = 3e-67 Identities = 991/1517 (65%), Gaps = 60/1517 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||| ||| ||||| |||| || ||| | || || | ||| ||| | | Sbjct 245739 TTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCC 245680 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || | |||||||| ||||||||||| || ||||| | || ||||||||| ||||| | Sbjct 245679 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGC 245620 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || | || |||||| || ||| | ||||| ||| ||| ||||| Sbjct 245619 AGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCAC 245560 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || |||||| || ||||||||||||||||| | ||||||| ||| |||| | Sbjct 245559 AGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAG 245500 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAG 145355 || | | | ||| ||| || | || ||||| ||||| || |||||||| | Sbjct 245499 CCCTCGTATGTCTCGTAGGGGCCG--AGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGG 245442 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || || || || |||||| || || ||||||||||| ||||| ||| ||| Sbjct 245441 CGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGA 245382 Query 145416 ACGGCATG-CGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 |||| ||| |||| ||| | || |||||||| || ||||| | || | ||||| ||| Sbjct 245381 ACGG-ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGC 245323 Query 145475 CGATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGA 145529 | || | ||||| ||| | ||| ||| | ||| | | ||| ||||| Sbjct 245322 CTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAGTT-GAT----GTCGA 245268 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 | || || || | |||| ||| | |||||| || | | || ||| | ||||| | Sbjct 245267 TGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGA 245208 Query 145590 A---CCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646 | ||| ||| ||| ||| | |||| |||||| || |||| || || | Sbjct 245207 AAGTCCG---CTCTGGCGTGACGT-ACA--TGTTGAGGGCGATGGAGGCCAGGTTGCAGA 245154 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | ||| ||| || | | |||| | || | ||| | ||| | ||||| ||||||| Sbjct 245153 CGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGA 245094 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 |||| ||||| || ||||| || || ||||||||||| |||||||||||||||||||| | Sbjct 245093 TGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGG 245034 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCAC 145824 | || || || ||| | ||| | ||| || || || | |||||| ||| Sbjct 245033 GCGTCCCGGTTTCGGTCTGGGACTCGATGAT--GGCGTACCAGAGCTGCTGCGCCTTCAC 244976 Query 145825 CTGCTGCTGGTAGCGGCCCT--CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAA 145882 | | || | | |||| |||| || ||| | ||||||||| ||| ||| | Sbjct 244975 CACCCTCT-TCACCCTCCCTTCCTTC-TCATATCTGGTGTAGAGCTTCTCGAACTCCTCT 244918 Query 145883 CCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTG 145942 || |||| ||| ||| |||||||||| | |||||||||||| ||||| | |||| Sbjct 244917 CCCCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTG 244858 Query 145943 GCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCG 146000 | || | || ||| |||| || || | ||||| ||||| | | ||| | || Sbjct 244857 CTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCT 244798 Query 146001 CTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCGT 146060 || ||| ||||| || |||| ||||| | || | | | ||| || Sbjct 244797 CTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGT 244740 Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCC--TTTTCGT-TTGCCACCCTGGTCCACGT 146117 |||||||||| | || | ||||| ||| || | || | ||||| |||||||| |||| Sbjct 244739 GCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGT 244680 Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177 || || ||||||| | || | || ||| || | | ||| ||| |||||| | Sbjct 244679 AGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGG 244620 Query 146178 T---AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGC 146234 | || | || | | || || || | ||| || |||||||| |||| Sbjct 244619 TGCCAGCG---ATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGC 244563 Query 146235 CGCCGTACTTGGATAT-AGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTA 146293 | || ||||||| || ||| ||||| | || || ||||||||||| || ||||| Sbjct 244562 CAGCGGACTTGGAAATGAGC-GCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTG 244504 Query 146294 TCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG--CGTCCCCGC 146349 ||| |||| ||| |||||| ||||| | ||| ||||| | ||| ||||| || Sbjct 244503 TCGTCCTTC--ATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGC--CGGTTGGTCCCGGC 244448 Query 146350 CGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTT 146408 ||| | ||||| ||||| || || || || || | || | || || | Sbjct 244447 GTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCG-ACAGGAGGTTGTAGGTCT 244389 Query 146409 CGATAGCGTCTTGAATGTCGTCG-CCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 |||| || | | ||||| ||| || || || || | | || | |||||||||||| Sbjct 244388 CGATGGCAGCGTCGATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGC 244330 Query 146468 TGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTG 146527 || |||||||| ||||||| || ||||| | || ||| | |||||| || ||| Sbjct 244329 TGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTG 244270 Query 146528 TATCCGAAAAATTTGTA 146544 | ||||| || ||||| Sbjct 244269 AAACCGAAGAAGTTGTA 244253 >seq577 Length=410616 Score = 118 bits (130), Expect = 1e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||||| |||||||| | ||| | |||||| | |||||||| |||||||||||||| | Sbjct 151943 TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGT 152002 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 | | ||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct 152003 TGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTGCG 152062 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 152063 ACTCGATGAT 152072 >seq722 Length=280156 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || || ||||| | || | ||| |||||||| || || ||||| || Sbjct 192181 GCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGA 192122 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || ||||| || || || |||||| | ||||||||| ||||| Sbjct 192121 CAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGG 192062 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || |||||||| || ||| | | ||| || | | ||| | ||||| ||| ||| | Sbjct 192061 AATGCCTTCTTTATCC-TGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCA 192003 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| |||||||||||||| Sbjct 192002 CCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 191954 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | || | ||| |||||||| || ||||| || || || |||||| || Sbjct 192393 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCATCT 192334 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||| || || || |||||| | ||||||||| ||||| || ||||||| || Sbjct 192333 TCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCC 192274 Query 131143 GTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| | | ||| || | | ||| | ||||| ||| ||| | || | ||| | || Sbjct 192273 -TGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGT 192215 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || || || || ||||| ||||||||||||||| || Sbjct 192214 CTTCCCAGTGAGGGTTTTCACGAAAATCTGCATGCCT 192178 >seq2100 Length=111253 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || ||| || || | || | ||| || || || || |||||||| || Sbjct 23159 GCCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGA 23218 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| || |||| | | ||||||||| || || Sbjct 23219 AAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGG 23278 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || |||||| ||||| | ||| | || ||| ||| || | Sbjct 23279 GATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCAC 23338 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | |||||| || || || || || ||||| ||||||||| Sbjct 23339 CTCCAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 23387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471906667921920