Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq8444 118 7e-22
seq7625 118 7e-22
seq2655 118 7e-22
seq387 116 2e-21
seq7265 109 4e-19
seq2853 98.7 7e-16
seq1534 95.1 8e-15
seq722 93.3 3e-14
>seq8444
Length=1240
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||| | || ||||| || ||||||||
Sbjct 528 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGT 469
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 468 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 434
>seq7625
Length=1698
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||| | || ||||| || ||||||||
Sbjct 1152 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGT 1093
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 1092 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1058
>seq2655
Length=78278
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| ||| | || ||||| || ||||||||
Sbjct 41431 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGT 41372
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 41371 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 41337
>seq387
Length=369545
Score = 116 bits (128), Expect = 2e-21
Identities = 129/172 (75%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378
|||| || || | ||| || || ||||| || |||||||| ||||||||| ||||||||
Sbjct 176231 ACCCAACCAAGTTTTTTGGTTGTGAACTCGGTGCTCAGACCCAGTTTGATACCAAAAACG 176172
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| || | |||||| |||||||| || | | |||| ||||||| | ||||| || |
Sbjct 176171 ATCGTTACATCGTCAACGGATCCCACGAGGCGAACAAGTTGCAGGATATGCTTGATGGGT 176112
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490
| || | || ||||||||||||| || ||||| ||||| || || || ||
Sbjct 176111 TCATCAGAAAATTTGTGCTGTGTCCTGAGTGCGACAACCCTGAAACTGACCT 176060
>seq7265
Length=2093
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| || | || ||||| || ||||||||
Sbjct 176 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGTATTGGAGTTAGGGACAGTGGGAATCTCGT 117
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| ||| ||||||||||||||||||||||||||||
Sbjct 116 TCCTCCATTCATGCGCGTCACTAATTAGATGACGA 82
>seq2853
Length=87655
Score = 98.7 bits (108), Expect = 7e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 87424 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGGACTTGTCGACTATCGGTCTCGT 87365
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 87364 GCCGGTATTTAGCCTTA 87348
>seq1534
Length=184825
Score = 95.1 bits (104), Expect = 8e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||
Sbjct 36542 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 36601
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 36602 GCCGGTATTTAGCCTTA 36618
>seq722
Length=280156
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| || |||| || | ||||| || || ||| |||||| || |||||||| || |||
Sbjct 192180 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 192121
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| || | || || | ||||| || ||||| ||||| | || || || | ||
Sbjct 192120 AGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGA 192061
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||||||||| ||| ||| ||| |||||| |||| | ||||| | || ||
Sbjct 192060 ATGCCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACC 192001
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|| | || || || || || || | |||||||||||| |||||||| |||
Sbjct 192000 TCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATCTTT 191950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334873769944028
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |