Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 105 6e-18
>seq2100
Length=111253
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || ||||| ||||| | ||||| ||| ||||||| | || ||||
Sbjct 23850 ACGCAAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGG 23791
Query 25051 AGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCAC 25110
|| | ||||| || ||| | ||| |||||| || || || || || || |
Sbjct 23790 AGCCCAGCGACACCATTGAGAACGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCC 23731
Query 25111 CTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCG 25170
||||||| ||| || | || ||||| || || || | ||||||| ||||| || |
Sbjct 23730 CTGACCAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTG 23671
Query 25171 ATTACAATATTCAAAAAGAATCCACGCTACA 25201
| |||||||| |||||||||||||| || ||
Sbjct 23670 ACTACAATATCCAAAAAGAATCCACCCTCCA 23640
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || | ||||| ||| ||||||| | || |||||| | |
Sbjct 27804 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCCAGT 27745
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || ||| | ||| || ||| || || || || || || ||||||||
Sbjct 27744 GACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 27685
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| || || | ||||||| ||||| || ||| |||||
Sbjct 27684 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 27625
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||||||||| || ||
Sbjct 27624 ATCCAGAAAGAATCCACACTCCA 27602
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| ||| ||||||| | || || ||| | |
Sbjct 27576 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGAGCCCAGT 27517
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || ||| | ||| || ||| || || || || || || ||||||||
Sbjct 27516 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 27457
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| || || | ||||||| ||||| | || |||||
Sbjct 27456 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAAC 27397
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| ||||||||||| || || ||
Sbjct 27396 ATCCAAAAAGAATCTACCCTCCA 27374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433233002044220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |