Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq86 102 2e-16
seq2097 93.3 9e-14
seq1704 93.3 9e-14
seq1156 93.3 9e-14
seq58 93.3 9e-14
seq1751 91.5 3e-13
seq315 91.5 3e-13
seq194 91.5 3e-13
seq971 89.7 1e-12
seq15 87.8 4e-12
seq1399 86.0 1e-11
>seq86
Length=659436
Score = 102 bits (112), Expect = 2e-16
Identities = 592/931 (64%), Gaps = 31/931 (3%)
Strand=Plus/Minus
Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586
||||| | ||| ||||| ||| | || || ||||| | || | |||||| ||||
Sbjct 245529 TACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCT 245470
Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646
| | ||| ||||| ||||| | || || ||| ||| ||||||||||| |
Sbjct 245469 GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATG 245410
Query 293647 TTGAGCTTGCGAGCCTGCTCAGAG---TCAAACGGCATCTT-CAGCTGGAAGAACACATC 293702
|||||| || | || || | | || ||||| || | || | ||| ||| ||||
Sbjct 245409 TTGAGCA-GCTGGGCT--TCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATC 245354
Query 293703 CTGCAGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTC 293762
||||||||| || || | || | || | | ||||||||| |||||| || ||
Sbjct 245353 GGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTC 245294
Query 293763 GGGAACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTTCTTCGTGAGAACCTTGAC 293822
||| |||| || | | || ||| || ||| ||||| ||| || ||||||
Sbjct 245293 GGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGG- 245235
Query 293823 ATGCTTGCGG--AGGTCCTCAAAGTCAAATGCA---TCATTCTTGACATAGTTCTTGAGC 293877
|| | || || | || ||||| || | || | |||| || | |||||
Sbjct 245234 -TGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGGCGTGACGTACATGTTGAGG 245176
Query 293878 ACGATGCTACCGATGACACACACTGCAGTCTCCTCCTTCGAGGTGTACTCGACAATCTCA 293937
||||| | | | || || || ||| ||||| ||||||||| || | |||
Sbjct 245175 GCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCT 245116
Query 293938 GCACAGAGGTTACTGCCCTTGATGGTGCCCGCATTAGACTGCATGTTCTTGGCATTGACA 293997
| |||||||| |||| |||||||||||| || ||| || |||| ||| |
Sbjct 245115 GTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAA 245056
Query 293998 CTGTCTTTGTTGAGGACATATGGCATACCCGTTTCAATCTGAGTGGTGACCATGGTGTTC 294057
||| |||| ||| | || ||| | || ||||| |||| | || |||| || |
Sbjct 245055 GCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTAC 244996
Query 294058 CAGACATCGCGAGCCTTCACCACGCGCTTTGCCTTCCCCTCAGACTCATACTTGGTGTAA 294117
|||| | | ||||||||||| | ||| || |||| || |||||| |||||||
Sbjct 244995 CAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAG 244936
Query 294118 AGCTCTTCGTATTCCTTGCCATATACATCAGACAGGCCAGGGCACTCGTGAGGGTCA-AG 294176
|||| ||| | |||| || | || ||| || || |||||| ||| || |
Sbjct 244935 AGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG-CTGGGACACAT 244877
Query 294177 TAGAGACCA---CTGGGCATCAGTCTCCACGCGCTTCATGAATAGATCATTGACCCACAT 294233
| ||||| |||| | ||||||| | ||||||||| || || || |||||
Sbjct 244876 CAAGGACCAGTCCTGG---TTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAA 244820
Query 294234 TGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT-TGAT-TACGACGGAGGAGC 294291
||||| || | || | ||| | | | ||||| ||| || | | | | || |
Sbjct 244819 GGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTC--AGCTCC 244762
Query 294292 AGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACAGCAAAGGACCC---CTTC 294348
|||||||| | | |||| || |||||||| |||| || |||| ||| ||
Sbjct 244761 AGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTC 244702
Query 294349 CTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAACACCTTCAGCATAGGCACG 294408
|| || ||||||| | ||||| || ||| ||| | || ||||||| || ||
Sbjct 244701 TTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACC 244642
Query 294409 ATGCCATCGGACTCACCATTGGTTCC-GCGA 294438
| || | ||| | || ||||| || ||||
Sbjct 244641 AATCCGTTGGAGTTGCCGTTGGTGCCAGCGA 244611
>seq2097
Length=111468
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 60441 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 60382
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 60381 GCCCCACGTTGGGC 60368
>seq1704
Length=143687
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 96541 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 96482
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 96481 GCCCCACGTTGGGC 96468
>seq1156
Length=203910
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 139526 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 139467
Query 142563 CCCCACATCGGGCAGA 142578
|||||| | |||| ||
Sbjct 139466 CCCCACGTTGGGCGGA 139451
>seq58
Length=1141134
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 809080 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 809021
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 809020 GCCCCACGTTGGGC 809007
>seq1751
Length=140096
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 68847 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 68788
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 68787 CCCCACGTTGGGC 68775
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 77386 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 77327
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 77326 CCCCACGTTGGGC 77314
>seq315
Length=401937
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 194382 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 194323
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 194322 CCCCACGTTGGGC 194310
>seq194
Length=599432
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 580838 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 580779
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 580778 CCCCACGTTGGGC 580766
>seq971
Length=233873
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 38231 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 38290
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 38291 CCCACGTTGGGC 38302
>seq15
Length=898797
Score = 87.8 bits (96), Expect = 4e-12
Identities = 67/77 (87%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||
Sbjct 548699 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 548757
Query 142107 TCGACCCCCGCCAGAGA 142123
|||| |||| ||||||
Sbjct 548758 TCGAGTCCCGGCAGAGA 548774
>seq1399
Length=339438
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 289885 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 289826
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 289825 TCCCGGCAGAGA 289814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027599913167908
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