Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 170 4e-37
seq722 158 2e-33
seq86 109 1e-18
seq990 93.3 8e-14
seq577 84.2 4e-11
>seq2100
Length=111253
Score = 170 bits (188), Expect = 4e-37
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || || || |||||||||||||| || || || || || | |||||||| | |||
Sbjct 27373 GTGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTG 27432
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| ||||| || || || || || ||||| || || ||||| ||||| || || |||||
Sbjct 27433 CTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTT 27492
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
||||||||| ||| |||||||| | || || |||| |||||||||||| || ||
Sbjct 27493 GGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTGCCGGT 27552
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
||||||||||||||| ||||||||
Sbjct 27553 GAGGGTCTTGACGAAGATCTGCAT 27576
Score = 168 bits (186), Expect = 1e-36
Identities = 165/210 (79%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || |||||||| || |||||||| || || || || || | ||||||||
Sbjct 23406 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 23465
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| ||||| || || || || || || || || || ||||| ||||| || ||
Sbjct 23466 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGG 23525
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTT 68431
||||| ||||||||| ||| |||||||| |||| || || |||| ||||||||| ||
Sbjct 23526 ATCTTGGCCTTGACGTTCTCAATGGTGTC-GCTGGGCTCAACCTCCAGGGTGATGGTCTT 23584
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||||||||||||||| ||||||||
Sbjct 23585 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 23614
Score = 159 bits (176), Expect = 6e-34
Identities = 160/205 (78%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || || || ||||| |||||||| || || || || || | ||||| || | |||
Sbjct 23183 GTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTG 23242
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || || || || ||||| || || ||||| ||||| || || || ||
Sbjct 23243 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTT 23302
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAGGTGATGGTTTTTCCCG 68436
||||||||| ||| |||||||| |||| ||| || |||| |||||||||||| || |
Sbjct 23303 GGCCTTGACGTTCTCAATGGTGTC-GCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAG 23361
Query 68437 TGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||||||||| ||||||||
Sbjct 23362 TGAGGGTCTTGACGAAGATCTGCAT 23386
Score = 159 bits (176), Expect = 6e-34
Identities = 160/205 (78%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317
||| || ||||| ||||||||||| || || || || || || | |||||||| | |||
Sbjct 23639 GTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 23698
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || || || || || || || ||||| || || ||||| ||||| || || || ||
Sbjct 23699 CTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTT 23758
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCG 68436
||||||||| ||| |||||||| ||| | || || |||| |||||||||||| || |
Sbjct 23759 GGCCTTGACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGG 23817
Query 68437 TGAGGGTCTTGACGAATATCTGCAT 68461
||||||||||||| || ||||||||
Sbjct 23818 TGAGGGTCTTGACAAAGATCTGCAT 23842
Score = 152 bits (168), Expect = 9e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| || ||||| ||||| |||||||| || ||||| || || | ||||||||
Sbjct 27596 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 27655
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| ||||| || || || || || ||||| || || ||||| ||||| || ||
Sbjct 27656 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 27715
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| || ||| |||||||| | || || || | ||||||||||||
Sbjct 27716 ATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTG 27775
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| || || || ||||||||
Sbjct 27776 CCGGTGAGGGTTTTCACAAAGATCTGCAT 27804
>seq722
Length=280156
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||||| | |||| ||| || |||||||| || ||||| || || || ||
Sbjct 192180 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 192121
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||| || || || || || || || || ||||| || |||
Sbjct 192120 AGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGA 192061
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||| || || |||||||||||||| ||| ||| ||||| || | || ||
Sbjct 192060 ATGCCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACC 192001
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||||| || || |||||||| || ||||| ||||||||
Sbjct 192000 TCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 191954
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||| | |||| | |||| ||| || |||||||| || |||||||| || || ||
Sbjct 192409 TCCTCCCCTCAGGCAGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGA 192350
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | |||||||| | ||| || || || || || || || || ||||| || ||
Sbjct 192349 CAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGG 192290
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|||| |||| || || |||||||||||||| ||| ||| ||||| || | || ||
Sbjct 192289 AATGTCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCAC 192230
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||| || || || |||||||| || ||||| ||||||||
Sbjct 192229 CTCCAGGGTGATAGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 192182
>seq86
Length=659436
Score = 109 bits (120), Expect = 1e-18
Identities = 600/945 (63%), Gaps = 26/945 (3%)
Strand=Plus/Minus
Query 31379 GGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTC 31438
||| ||| ||||| | ||||||||||| |||||||| || || ||| || ||||
Sbjct 245482 GGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTC 245423
Query 31439 AAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATG-CGCAGCTTGA 31497
||||| | |||||| || ||| || || || || ||| |||| | ||
Sbjct 245422 GAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGG-ATGTCGCATCAGGA 245364
Query 31498 AGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAG 31557
||| | || ||||||||||| || | || || || | ||||| |||| |
Sbjct 245363 TGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACG 245304
Query 31558 TCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGCCA 31617
||| || ||||| | | |||| | ||| ||| ||| |||||| |||||| || | |
Sbjct 245303 TCTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGA 245244
Query 31618 GAATCTTCACGTGCTTGCGA--AGGTCCTCAAAGTCGTAGGCACCGTTCT----TGACGT 31671
| ||| ||| | | || | || |||||| | | ||| ||| ||||||
Sbjct 245243 TTACCTTG--GTGACGGAGGCCAGCTTCTTGAAGTCGAAAGT-CCGCTCTGGCGTGACGT 245187
Query 31672 AGTTCTGGAGGACGATGCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGTGTATT 31731
| | | |||| ||||| | | | || || ||| |||||| | ||||| |
Sbjct 245186 ACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACT 245127
Query 31732 CGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCATGTTCT 31791
| || | ||| | || || ||||||| |||||||||| || ||| || |||
Sbjct 245126 CCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCT 245067
Query 31792 TCACGTT-CACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATG 31850
|| ||| || || |||||||| ||||| ||| ||| | || || ||| |||| | |
Sbjct 245066 TCCTGTTGCAAGC-GTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCG 245008
Query 31851 ATCATCGCATTCCAGACATCGCGCGCTTTGACGACTTTCTTCGCACGCCCCTCGGACTCG 31910
|| || || | ||||| | |||| || || || ||||| | | ||| || |||
Sbjct 245007 ATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCA 244948
Query 31911 TAGCGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCATCGGTTAGACCGGGACACTCC 31970
|| | || || | |||| |||||| || || ||| || |||||||||||
Sbjct 244947 TATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG 244888
Query 31971 TTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTC 32030
|||| | | ||||| | | | ||| |||| |||||||||||||||
Sbjct 244887 CTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGG 244828
Query 32031 AGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTC-G 32089
| ||||| ||||| || || | ||||| | || ||||| |||| | | ||
Sbjct 244827 ATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCT-TTCCTGTGTTCTTCTT 244769
Query 32090 GAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAA------ 32143
||| ||||||||| | | |||| ||| || || ||||||| ||||||
Sbjct 244768 CAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCC 244709
Query 32144 AGATCCCTTGCGGCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCGTACACCTTCAG 32203
| || |||| | || ||||||| |||| || || ||| ||| || ||||
Sbjct 244708 GGGTCTCTTGTTG---CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAG 244652
Query 32204 CATGGGTACGATGCCATCAGACTCGCCATTGGTCCCCTGGATCTTGGAACCACGGC-CGC 32262
||| || || | || | || | ||| ||||| || ||| | | || || | |
Sbjct 244651 CATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCAGCGATGTAGCTTCC-CGTCGATC 244593
Query 32263 GAATGTCGCTCAGGTGCAGGCCGATGCCGCCACCAAACTTGGAAA 32307
| ||| ||||| || |||||| |||||| | |||||||||
Sbjct 244592 GGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAA 244548
>seq990
Length=431866
Score = 93.3 bits (102), Expect = 8e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||||||| | ||||||||||| ||||| ||| |||||||||| ||| |||||
Sbjct 239334 CATGACGCCCATCCTCTGGTACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTC 239275
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|| |||||| |||||||||||| || ||||||||
Sbjct 239274 CAGAGAAATGTTCTCCATGAAGTCGAACGGGTTCTC 239239
>seq577
Length=410616
Score = 84.2 bits (92), Expect = 4e-11
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 31725 GTGTATTCGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGC 31784
||||||||||| ||||| | || ||||||||| | |||||||||| ||| |||
Sbjct 151942 GTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGG 152001
Query 31785 ATGTTCTTCACGTT-CACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTG 31843
|| ||||| ||| || || |||||||| ||||| ||| ||| | |||||||| ||||
Sbjct 152002 TTGGTCTTCCTGTTGCAGGC-GTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTG 152060
Query 31844 CGTGATGATCATCGCATTCCAGA 31866
|| ||| || || | |||||
Sbjct 152061 CGACTCGATGATGGCGTACCAGA 152083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921415173203360
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