Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2100 170 4e-37 seq722 158 2e-33 seq86 109 1e-18 seq990 93.3 8e-14 seq577 84.2 4e-11 >seq2100 Length=111253 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || |||||||||||||| || || || || || | |||||||| | ||| Sbjct 27373 GTGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTG 27432 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| ||||| || || || || || ||||| || || ||||| ||||| || || ||||| Sbjct 27433 CTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTT 27492 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 ||||||||| ||| |||||||| | || || |||| |||||||||||| || || Sbjct 27493 GGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTGCCGGT 27552 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 ||||||||||||||| |||||||| Sbjct 27553 GAGGGTCTTGACGAAGATCTGCAT 27576 Score = 168 bits (186), Expect = 1e-36 Identities = 165/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || |||||||| || |||||||| || || || || || | |||||||| Sbjct 23406 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 23465 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||||| || || || || || || || || || ||||| ||||| || || Sbjct 23466 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGG 23525 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTCCAAGGTGATGGTTTT 68431 ||||| ||||||||| ||| |||||||| |||| || || |||| ||||||||| || Sbjct 23526 ATCTTGGCCTTGACGTTCTCAATGGTGTC-GCTGGGCTCAACCTCCAGGGTGATGGTCTT 23584 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||||||||| |||||||| Sbjct 23585 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 23614 Score = 159 bits (176), Expect = 6e-34 Identities = 160/205 (78%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || ||||| |||||||| || || || || || | ||||| || | ||| Sbjct 23183 GTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTG 23242 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || || || || ||||| || || ||||| ||||| || || || || Sbjct 23243 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTT 23302 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAGGTGATGGTTTTTCCCG 68436 ||||||||| ||| |||||||| |||| ||| || |||| |||||||||||| || | Sbjct 23303 GGCCTTGACGTTCTCAATGGTGTC-GCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAG 23361 Query 68437 TGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||||| |||||||| Sbjct 23362 TGAGGGTCTTGACGAAGATCTGCAT 23386 Score = 159 bits (176), Expect = 6e-34 Identities = 160/205 (78%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||||| ||||||||||| || || || || || || | |||||||| | ||| Sbjct 23639 GTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 23698 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || || || || ||||| || || ||||| ||||| || || || || Sbjct 23699 CTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTT 23758 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCG 68436 ||||||||| ||| |||||||| ||| | || || |||| |||||||||||| || | Sbjct 23759 GGCCTTGACGTTCTCAATGGTGTC-GCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGG 23817 Query 68437 TGAGGGTCTTGACGAATATCTGCAT 68461 ||||||||||||| || |||||||| Sbjct 23818 TGAGGGTCTTGACAAAGATCTGCAT 23842 Score = 152 bits (168), Expect = 9e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || ||||| ||||| |||||||| || ||||| || || | |||||||| Sbjct 27596 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 27655 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||||| || || || || || ||||| || || ||||| ||||| || || Sbjct 27656 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 27715 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || ||| |||||||| | || || || | |||||||||||| Sbjct 27716 ATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTG 27775 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || || |||||||| Sbjct 27776 CCGGTGAGGGTTTTCACAAAGATCTGCAT 27804 >seq722 Length=280156 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | ||||| | |||| ||| || |||||||| || ||||| || || || || Sbjct 192180 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 192121 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || || || || || || || ||||| || ||| Sbjct 192120 AGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGA 192061 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| || || |||||||||||||| ||| ||| ||||| || | || || Sbjct 192060 ATGCCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACC 192001 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || |||||||| || ||||| |||||||| Sbjct 192000 TCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 191954 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 |||||| | |||| | |||| ||| || |||||||| || |||||||| || || || Sbjct 192409 TCCTCCCCTCAGGCAGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGA 192350 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | |||||||| | ||| || || || || || || || || ||||| || || Sbjct 192349 CAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGG 192290 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||| |||| || || |||||||||||||| ||| ||| ||||| || | || || Sbjct 192289 AATGTCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCAC 192230 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||| || || || |||||||| || ||||| |||||||| Sbjct 192229 CTCCAGGGTGATAGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 192182 >seq86 Length=659436 Score = 109 bits (120), Expect = 1e-18 Identities = 600/945 (63%), Gaps = 26/945 (3%) Strand=Plus/Minus Query 31379 GGGACCGTGCTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTC 31438 ||| ||| ||||| | ||||||||||| |||||||| || || ||| || |||| Sbjct 245482 GGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTC 245423 Query 31439 AAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATG-CGCAGCTTGA 31497 ||||| | |||||| || ||| || || || || ||| |||| | || Sbjct 245422 GAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGG-ATGTCGCATCAGGA 245364 Query 31498 AGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAG 31557 ||| | || ||||||||||| || | || || || | ||||| |||| | Sbjct 245363 TGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACG 245304 Query 31558 TCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGCCA 31617 ||| || ||||| | | |||| | ||| ||| ||| |||||| |||||| || | | Sbjct 245303 TCTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGA 245244 Query 31618 GAATCTTCACGTGCTTGCGA--AGGTCCTCAAAGTCGTAGGCACCGTTCT----TGACGT 31671 | ||| ||| | | || | || |||||| | | ||| ||| |||||| Sbjct 245243 TTACCTTG--GTGACGGAGGCCAGCTTCTTGAAGTCGAAAGT-CCGCTCTGGCGTGACGT 245187 Query 31672 AGTTCTGGAGGACGATGCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGTGTATT 31731 | | | |||| ||||| | | | || || ||| |||||| | ||||| | Sbjct 245186 ACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACT 245127 Query 31732 CGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCATGTTCT 31791 | || | ||| | || || ||||||| |||||||||| || ||| || ||| Sbjct 245126 CCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCT 245067 Query 31792 TCACGTT-CACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATG 31850 || ||| || || |||||||| ||||| ||| ||| | || || ||| |||| | | Sbjct 245066 TCCTGTTGCAAGC-GTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCG 245008 Query 31851 ATCATCGCATTCCAGACATCGCGCGCTTTGACGACTTTCTTCGCACGCCCCTCGGACTCG 31910 || || || | ||||| | |||| || || || ||||| | | ||| || ||| Sbjct 245007 ATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCA 244948 Query 31911 TAGCGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCATCGGTTAGACCGGGACACTCC 31970 || | || || | |||| |||||| || || ||| || ||||||||||| Sbjct 244947 TATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG 244888 Query 31971 TTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTC 32030 |||| | | ||||| | | | ||| |||| ||||||||||||||| Sbjct 244887 CTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGG 244828 Query 32031 AGCCACATCGCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTC-G 32089 | ||||| ||||| || || | ||||| | || ||||| |||| | | || Sbjct 244827 ATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCT-TTCCTGTGTTCTTCTT 244769 Query 32090 GAGCAGCAGGAAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAA------ 32143 ||| ||||||||| | | |||| ||| || || ||||||| |||||| Sbjct 244768 CAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCC 244709 Query 32144 AGATCCCTTGCGGCGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCGTACACCTTCAG 32203 | || |||| | || ||||||| |||| || || ||| ||| || |||| Sbjct 244708 GGGTCTCTTGTTG---CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAG 244652 Query 32204 CATGGGTACGATGCCATCAGACTCGCCATTGGTCCCCTGGATCTTGGAACCACGGC-CGC 32262 ||| || || | || | || | ||| ||||| || ||| | | || || | | Sbjct 244651 CATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCAGCGATGTAGCTTCC-CGTCGATC 244593 Query 32263 GAATGTCGCTCAGGTGCAGGCCGATGCCGCCACCAAACTTGGAAA 32307 | ||| ||||| || |||||| |||||| | ||||||||| Sbjct 244592 GGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAA 244548 >seq990 Length=431866 Score = 93.3 bits (102), Expect = 8e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||||||| | ||||||||||| ||||| ||| |||||||||| ||| ||||| Sbjct 239334 CATGACGCCCATCCTCTGGTACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTC 239275 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 || |||||| |||||||||||| || |||||||| Sbjct 239274 CAGAGAAATGTTCTCCATGAAGTCGAACGGGTTCTC 239239 >seq577 Length=410616 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 31725 GTGTATTCGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGC 31784 ||||||||||| ||||| | || ||||||||| | |||||||||| ||| ||| Sbjct 151942 GTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGG 152001 Query 31785 ATGTTCTTCACGTT-CACGCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTG 31843 || ||||| ||| || || |||||||| ||||| ||| ||| | |||||||| |||| Sbjct 152002 TTGGTCTTCCTGTTGCAGGC-GTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTG 152060 Query 31844 CGTGATGATCATCGCATTCCAGA 31866 || ||| || || | ||||| Sbjct 152061 CGACTCGATGATGGCGTACCAGA 152083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921415173203360