Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq86 163 3e-35
seq577 89.7 6e-13
seq4 87.8 2e-12
>seq86
Length=659436
Score = 163 bits (180), Expect = 3e-35
Identities = 887/1391 (64%), Gaps = 44/1391 (3%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| |||||||||||
Sbjct 245700 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 245641
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| ||||||||||| |||| || |||||||| | | || | || || |||
Sbjct 245640 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 245581
Query 114062 TTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGG 114118
|| || | |||||| | || | | |||| | || ||||| || |||||
Sbjct 245580 TTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCC---CACATGTCGTACTGG 245524
Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178
||||| || | | | ||||| ||||| |||||||||| ||||| | | ||
Sbjct 245523 AGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCG 245464
Query 114179 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238
| |||| |||| ||||| ||||| ||||| || || ||||| || || | || |
Sbjct 245463 AGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGC 245404
Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 114298
|| ||| ||| | || |||| |||| || || || |||| || |||||
Sbjct 245403 AGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCC 245344
Query 114299 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACGGG 114357
||||| |||| || || || | || | | | || ||| | ||| || || ||
Sbjct 245343 TGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCG-GCTTCGGGGACCGG 245285
Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417
|| | || | ||||| | | | || || ||||| || ||||| ||||
Sbjct 245284 GTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGC 245225
Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477
||||| | | | || ||| | || |||| |||| ||| | |||||||| ||
Sbjct 245224 CAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCGATGGA 245168
Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537
||||| || || || | ||| ||||| |||||||| | | || || || |
Sbjct 245167 GGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAG 245108
Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597
|| | || |||||||||| ||||| || || ||| |||| || || |||||
Sbjct 245107 GTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTT 245048
Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT- 114656
||| |||||||| |||||||| || || || ||||||| || || || | ||||| |
Sbjct 245047 GTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGCTG 244988
Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTT 114716
| ||| || || | || | | ||| |||| ||| || | |||||||| |
Sbjct 244987 CTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCT 244929
Query 114717 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGAC 114775
| ||||| || ||| | ||| ||||| || || ||||| || | | |||
Sbjct 244928 CGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG-CTGGGACACATCAAGGAC 244870
Query 114776 CATTGACCACCCTCCTCAACACGCT--TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGA 114833
|| | || | ||| ||| || ||||||| ||||| |||||||| | || |||
Sbjct 244869 CAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGA 244812
Query 114834 AGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 114892
| || || | | | ||| || | | || || || || ||||| |||||
Sbjct 244811 AAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAGTCG 244753
Query 114893 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACC 114948
| | || |||||||||||||||||||| |||| | ||| || | | ||
Sbjct 244752 AACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTG-CC 244694
Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008
|||||| || || | || ||| || | || | ||||| || | | || |
Sbjct 244693 GCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTT 244634
Query 115009 AGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC--TCTGA--CA--TCATGGAT 115062
|| | ||| || || || || || ||| | | || || || ||| |
Sbjct 244633 GGAGTTGCCGTTGGTGCCAGCGATGT-AG-CTTCCCGTCGATCGGATGCAGCTCACCGC- 244577
Query 115063 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 115122
|| || || || || || |||| || || ||||||||| | | || || ||||
Sbjct 244576 ---CACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTA 244520
Query 115123 GATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT 115182
||| || ||||| ||| |||| | | || ||||||||||| |||| || ||||
Sbjct 244519 GATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC- 244461
Query 115183 TGGT--GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239
||| || || |||||||||||||| || | |||||| ||||| || | | ||||
Sbjct 244460 -GGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAG 244403
Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299
| ||||||||| | | | ||| |||||| |||||| || || | ||| ||||
Sbjct 244402 GAGGTTGTAGGTCTCGATGGCAGCGTCGATGTCTCGCCCGTGGATCCCAACCGACACCCT 244343
Query 115300 CATAAACATGT 115310
||| | |||||
Sbjct 244342 CATGAGCATGT 244332
>seq577
Length=410616
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| | ||||| | ||||||||||||||| ||| ||||| |||||
Sbjct 150344 TAGATGTTGCTTGTGTACGCCTCAATGGACTCATTGTTACCCAGGATCTGGGCAGTGGAA 150403
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033
||||||||||| || |||| || || |||||
Sbjct 150404 GCTGTGGGCATCGGGGCCAAAAGCAGACTGTT 150435
>seq4
Length=1291530
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
||||||| | | |||||||| || ||| || || ||||||||||| || | |||||
Sbjct 279436 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 279495
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185
||| |||| | || ||| ||||| || |||||||| || |||||||| ||||| |
Sbjct 279496 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAAATCCCCTCCACTGCTGCGAAAG 279555
Query 126186 CAAAGAGACGCTC 126198
| | ||||||||
Sbjct 279556 CCACAAGACGCTC 279568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597219285043040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |