Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 107 2e-18
>seq2100
Length=111253
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||||||||| |||||||| || | | |||||| | ||||| |||||||| |||
Sbjct 27380 GTAGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 27439
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || || || || || || || || |||
Sbjct 27440 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 27499
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || |||| || || || || | || | ||| |||||||| | ||
Sbjct 27500 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTC 27559
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 27560 TTGACGAAGATCTGCAT 27576
Score = 100 bits (110), Expect = 3e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||||||||| || ||||| || | | |||||| | ||||| |||||||| ||
Sbjct 23646 GTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 23705
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || || || || || || ||||| |||
Sbjct 23706 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 23765
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | || ||||| || | || | ||| |||||||| | ||
Sbjct 23766 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTC 23825
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| || || || ||||| ||
Sbjct 23826 TTGACAAAGATCTGCATGTT 23845
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| |||||||| || |||||||| || | | |||||| | || || |||||||||||
Sbjct 23190 GTAGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 23249
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || || || || || || || ||||| |||
Sbjct 23250 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 23309
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | || ||||| || | || | ||| ||||| || | ||
Sbjct 23310 ACGTTCTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAGTGAGGGTC 23369
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 23370 TTGACGAAGATCTGCAT 23386
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || || |||||||| || | | |||||| | |||
Sbjct 23403 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 23462
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| |||||| | || |||| |||||| || || || || || || || ||
Sbjct 23463 TCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTATCC 23522
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || ||| | || || | || || || || | || | ||||
Sbjct 23523 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTC 23582
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || ||||| || |||||
Sbjct 23583 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 23614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499532454866720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |