Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq86 277 2e-69 >seq86 Length=659436 Score = 277 bits (306), Expect = 2e-69 Identities = 988/1524 (65%), Gaps = 39/1524 (3%) Strand=Plus/Plus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 ||||| ||||||||| || ||||| || ||||| | || | || ||||||| ||| Sbjct 244268 TTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATCAACGGGAAAGTGGCCGAGCGGCCG 244327 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACAT-GCCGAATGTTTT 93851 || || |||| ||| | || | | ||||| ||||| | ||||| | || || | Sbjct 244328 CAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATCGACGC-TGCCAT 244386 Query 93852 GCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCAA 93911 | | | || | || ||| ||| ||| ||| ||| | |||||||| ||||| Sbjct 244387 CGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCCTCTTCAA 244446 Query 93912 CGCGGGGACC--CCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGAC 93969 ||| |||||| |||| || ||| |||| || |||||| | || | |||| |||| Sbjct 244447 CGCCGGGACCAACCGG--CCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGACGAC 244504 Query 93970 TCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGG 94029 |||| || || | ||||| ||| ||| | || ||| ||| || || | ||| || Sbjct 244505 AGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCTGGC 244564 Query 94030 GGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAAT 94089 || ||||| | || | | | || | | ||| ||||||| || ||||| Sbjct 244565 GGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAGCTACATCGCTGGCACCAAC 244624 Query 94090 GGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTG 94149 |||| ||||||||| | ||||| ||||| | || | ||||||| |||| |||||||| Sbjct 244625 GGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCTACGTC 244684 Query 94150 GACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCG 94209 |||||||| || | ||| || | ||||| | || || || || |||||| Sbjct 244685 GACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAACCGTGGCACTTC 244744 Query 94210 GACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGA 94269 |||||| | ||| | || ||| |||||| || || || | |||| |||||| Sbjct 244745 GACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGAGCCAGA 244804 Query 94270 GACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCC 94329 ||||| |||||||| | ||| | || ||||| || ||||| | || |||| ||| Sbjct 244805 GACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAGTGGAGAGCAACCAG 244864 Query 94330 GCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGC 94387 | ||| ||| || | ||||||| || |||||||| ||| ||| || ||| | Sbjct 244865 GACTG--GTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTGGACGAGTGCTGGGGAGAGG 244922 Query 94388 GTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATG 94447 || || | | || | | || || | | || | || | || ||| || | | Sbjct 244923 AGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGAAGAGGGTGGTGAAGG 244982 Query 94448 CTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCT 94507 | | |||| ||| | ||| | || ||| || || || ||||||||||| Sbjct 244983 CGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAAACCGGGACGCCCTACATGC 245042 Query 94508 TGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCT 94567 | | ||||||| || |||| ||| |||||||||| |||| || ||||| || Sbjct 245043 TCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCA 245102 Query 94568 CGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACC 94627 || || ||||| ||| | || ||||| || ||||||| | || || || |||| Sbjct 245103 GCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAGGTGGCCGTCTGCAACC 245162 Query 94628 TGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCG 94687 ||| ||||||| || || || | || || | ||| | | | ||| |||| Sbjct 245163 TGGCCTCCATCGCCC--TCAACAT--GTACGTCACGCC-AGA-GCGGACT------TTCG 245210 Query 94688 ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTTGAACCTGAACAGGGTAAT 94745 | | || |||| | | || | |||| || || ||||| |||| | | || Sbjct 245211 ACTTCAAGAAGCTGGCCTCCGTCAC--CAAGGTAATCGTGAAAAACCTCAACAAGATCAT 245268 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| |||||| ||||| || || |||| || ||| | || |||| || Sbjct 245269 CGACATCAACTACTACCCGGTCCCCGAAGCCGAGACGTCCAACAAGCGCCACAGGCCGAT 245328 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865 ||| ||||||||||||||| | || || || | | ||||||| | || | ||| Sbjct 245329 CGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACATCCGTTCGAAAG 245388 Query 94866 TGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT-GA 94924 ||| || | | || | | || ||||| | ||| || ||| ||| | || Sbjct 245389 CCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCACGCCGCCCTGGA 245448 Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983 | | | | ||| | | |||| | ||| || |||| | | | || ||| Sbjct 245449 GGCCAGCTGCGAACTCGCCGCAGAGC-----TCGGCCCCTACGAGACATACGAGGGCTCG 245503 Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043 ||| | ||||||| | |||| |||| | |||| || ||| | | |||| Sbjct 245504 CCCGTCAGTAAGGGCATCCTCCAGTACGACATGTGGGAGAAGACGCCGACCGACCTGTGG 245563 Query 95044 GACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTT 95100 |||| ||||||| || | | | || | ||||||||| |||| ||| ||||| Sbjct 245564 GACT-GGAAGCTGCTGAAGGAGAAGA--TCGCCAAACACGGCGTGAGGAACAGCCTGCTG 245620 Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160 |||| |||||||||||||| ||||| || |||||||| |||||||||||||| |||| Sbjct 245621 CTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAG 245680 Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220 | | |||| |||| | |||| | | ||||||| |||| || |||| || ||||| Sbjct 245681 GCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATCGTCAAC 245740 Query 95221 AAGCACCTCCTACGGGACCTGACG 95244 |||||||| |||||||||| Sbjct 245741 CCTCACCTCCTCAAGGACCTGACG 245764 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 ||||||||||| || ||||| || | | | || |||||| | || ||| || | ||| Sbjct 243863 GTCATGTTCGATAAAATCACCTCCCGCATCCAGAAGCTTTGCTACGGCCTGAACCCGGAC 243922 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 || |||||||| | || ||||||||| |||| ||||| | || ||| ||||| Sbjct 243923 TTTGTGGATCCGGCTCAGATCACCATGAAGGTGATCCAGGGCTTGTACAGCGGCGTCACC 243982 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 || || ||||| || || || ||||||| ||| | ||| || || ||||| Sbjct 243983 ACCGTGGAGCTAGACACGCTAGCGGCGGAGATCGCGGCCACCCTGACGACCAAACACCCC 244042 Query 93511 GACTACTCCATTTTGGCTGC 93530 |||||| |||| |||| || Sbjct 244043 GACTACGCCATCCTGGCCGC 244062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494611961488480