Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq86 277 2e-69
>seq86
Length=659436
Score = 277 bits (306), Expect = 2e-69
Identities = 988/1524 (65%), Gaps = 39/1524 (3%)
Strand=Plus/Plus
Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792
||||| ||||||||| || ||||| || ||||| | || | || ||||||| |||
Sbjct 244268 TTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATCAACGGGAAAGTGGCCGAGCGGCCG 244327
Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACAT-GCCGAATGTTTT 93851
|| || |||| ||| | || | | ||||| ||||| | ||||| | || || |
Sbjct 244328 CAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATCGACGC-TGCCAT 244386
Query 93852 GCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCAA 93911
| | | || | || ||| ||| ||| ||| ||| | |||||||| |||||
Sbjct 244387 CGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCCTCTTCAA 244446
Query 93912 CGCGGGGACC--CCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGAC 93969
||| |||||| |||| || ||| |||| || |||||| | || | |||| ||||
Sbjct 244447 CGCCGGGACCAACCGG--CCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGACGAC 244504
Query 93970 TCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGG 94029
|||| || || | ||||| ||| ||| | || ||| ||| || || | ||| ||
Sbjct 244505 AGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCTGGC 244564
Query 94030 GGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAAT 94089
|| ||||| | || | | | || | | ||| ||||||| || |||||
Sbjct 244565 GGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAGCTACATCGCTGGCACCAAC 244624
Query 94090 GGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTG 94149
|||| ||||||||| | ||||| ||||| | || | ||||||| |||| ||||||||
Sbjct 244625 GGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCTACGTC 244684
Query 94150 GACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCG 94209
|||||||| || | ||| || | ||||| | || || || || ||||||
Sbjct 244685 GACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAACCGTGGCACTTC 244744
Query 94210 GACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGA 94269
|||||| | ||| | || ||| |||||| || || || | |||| ||||||
Sbjct 244745 GACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGAGCCAGA 244804
Query 94270 GACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCC 94329
||||| |||||||| | ||| | || ||||| || ||||| | || |||| |||
Sbjct 244805 GACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAGTGGAGAGCAACCAG 244864
Query 94330 GCCTGGAGTCTTT--TTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGC 94387
| ||| ||| || | ||||||| || |||||||| ||| ||| || ||| |
Sbjct 244865 GACTG--GTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTGGACGAGTGCTGGGGAGAGG 244922
Query 94388 GTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATG 94447
|| || | | || | | || || | | || | || | || ||| || | |
Sbjct 244923 AGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGAAGAGGGTGGTGAAGG 244982
Query 94448 CTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCT 94507
| | |||| ||| | ||| | || ||| || || || |||||||||||
Sbjct 244983 CGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCGAAACCGGGACGCCCTACATGC 245042
Query 94508 TGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCT 94567
| | ||||||| || |||| ||| |||||||||| |||| || ||||| ||
Sbjct 245043 TCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCA 245102
Query 94568 CGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACC 94627
|| || ||||| ||| | || ||||| || ||||||| | || || || ||||
Sbjct 245103 GCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAGGTGGCCGTCTGCAACC 245162
Query 94628 TGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCG 94687
||| ||||||| || || || | || || | ||| | | | ||| ||||
Sbjct 245163 TGGCCTCCATCGCCC--TCAACAT--GTACGTCACGCC-AGA-GCGGACT------TTCG 245210
Query 94688 ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTTGAACCTGAACAGGGTAAT 94745
| | || |||| | | || | |||| || || ||||| |||| | | ||
Sbjct 245211 ACTTCAAGAAGCTGGCCTCCGTCAC--CAAGGTAATCGTGAAAAACCTCAACAAGATCAT 245268
Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805
||||| |||| |||||| ||||| || || |||| || ||| | || |||| ||
Sbjct 245269 CGACATCAACTACTACCCGGTCCCCGAAGCCGAGACGTCCAACAAGCGCCACAGGCCGAT 245328
Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTC 94865
||| ||||||||||||||| | || || || | | ||||||| | || | |||
Sbjct 245329 CGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACATCCGTTCGAAAG 245388
Query 94866 TGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT-GA 94924
||| || | | || | | || ||||| | ||| || ||| ||| | ||
Sbjct 245389 CCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCACGCCGCCCTGGA 245448
Query 94925 AACAATCCGTCCACTTGGC-CAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG 94983
| | | | ||| | | |||| | ||| || |||| | | | || |||
Sbjct 245449 GGCCAGCTGCGAACTCGCCGCAGAGC-----TCGGCCCCTACGAGACATACGAGGGCTCG 245503
Query 94984 CCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTAC 95043
||| | ||||||| | |||| |||| | |||| || ||| | | ||||
Sbjct 245504 CCCGTCAGTAAGGGCATCCTCCAGTACGACATGTGGGAGAAGACGCCGACCGACCTGTGG 245563
Query 95044 GACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTT 95100
|||| ||||||| || | | | || | ||||||||| |||| ||| |||||
Sbjct 245564 GACT-GGAAGCTGCTGAAGGAGAAGA--TCGCCAAACACGGCGTGAGGAACAGCCTGCTG 245620
Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160
|||| |||||||||||||| ||||| || |||||||| |||||||||||||| ||||
Sbjct 245621 CTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAG 245680
Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220
| | |||| |||| | |||| | | ||||||| |||| || |||| || |||||
Sbjct 245681 GCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATCGTCAAC 245740
Query 95221 AAGCACCTCCTACGGGACCTGACG 95244
|||||||| ||||||||||
Sbjct 245741 CCTCACCTCCTCAAGGACCTGACG 245764
Score = 86.0 bits (94), Expect = 6e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390
||||||||||| || ||||| || | | | || |||||| | || ||| || | |||
Sbjct 243863 GTCATGTTCGATAAAATCACCTCCCGCATCCAGAAGCTTTGCTACGGCCTGAACCCGGAC 243922
Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450
|| |||||||| | || ||||||||| |||| ||||| | || ||| |||||
Sbjct 243923 TTTGTGGATCCGGCTCAGATCACCATGAAGGTGATCCAGGGCTTGTACAGCGGCGTCACC 243982
Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510
|| || ||||| || || || ||||||| ||| | ||| || || |||||
Sbjct 243983 ACCGTGGAGCTAGACACGCTAGCGGCGGAGATCGCGGCCACCCTGACGACCAAACACCCC 244042
Query 93511 GACTACTCCATTTTGGCTGC 93530
|||||| |||| |||| ||
Sbjct 244043 GACTACGCCATCCTGGCCGC 244062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494611961488480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |