Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq86 289 3e-73 seq722 93.3 4e-14 seq577 86.0 6e-12 >seq86 Length=659436 Score = 289 bits (320), Expect = 3e-73 Identities = 973/1489 (65%), Gaps = 42/1489 (3%) Strand=Plus/Minus Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134 ||||| ||| | | || | ||| ||||| ||||| || || || || |||| || || Sbjct 245694 TTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTG 245635 Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAAC 153194 |||||| ||||| || || |||| || |||||| || | ||||||| | Sbjct 245634 GGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGC 245575 Query 153195 GCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT 153254 || ||| |||||||| | | ||| ||| | ||||||||||||||| | | || Sbjct 245574 AGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCC 245515 Query 153255 CGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAGTTCGCA 153313 |||| |||| ||| | | || |||| |||| || || ||| |||||||| Sbjct 245514 TTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCA 245456 Query 153314 GCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGC 153373 ||| ||||| || ||| | | ||| ||||| ||| ||| || | ||||| | || Sbjct 245455 GCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGC 245396 Query 153374 TTCTTCGCTCTCGTACGGCATG-CGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATAC 153432 ||| ||| ||| |||| ||| |||| ||| | ||||| |||||||||||||||| | Sbjct 245395 TTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGC 245337 Query 153433 CGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGA 153491 ||| ||||| || | || || |||| || |||| || | | || |||| Sbjct 245336 CGATCCCGATCGGCCTGTGGCGCTTGTTG-GACGTCTCGGCTTCGGGGACCGGGTAGTAG 245278 Query 153492 TTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTC 153551 ||| ||||| || ||||||||||| ||| | || || || | | || ||| Sbjct 245277 TTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTC 245218 Query 153552 TCGAAATCATAGGTCATTTC-GTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAG 153610 | ||| || | ||| || | || |||| ||| || | ||| || || ||||| Sbjct 245217 TTGAAGTCGAAAGTCCGCTCTGGCGTGACGTA--CAT--GTTGAGGGCGATGGAGGCCAG 245162 Query 153611 ATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCT 153670 || ||||||||| ||| || | | |||||| ||| | ||| | |||||||||||| Sbjct 245161 GTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCT 245102 Query 153671 GCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAG 153730 |||||| ||| ||||| || ||||| ||||| || | ||||| ||||| ||| |||| Sbjct 245101 GCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAG 245042 Query 153731 CATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCG 153789 |||||| || ||||| ||| || | |||| ||| | || || | ||||| Sbjct 245041 CATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCG 244983 Query 153790 C--TC-GCACCCGCTGCCGATAGCGGCCC-TCGCTCTCGTATCGCTCGTACAGTCGCTCA 153845 | || ||||| || | | | ||| || |||| |||| ||| || ||| Sbjct 244982 CCTTCACCACCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCG 244927 Query 153846 AACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGACCA 153904 ||||| || || |||| ||| | || |||||||||| | || |||||||||| ||||| Sbjct 244926 AACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTG-GGACACATCAAGGACCA 244868 Query 153905 CATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAG 153964 | || | | || | ||||||||| ||||| | ||| | ||||| | || Sbjct 244867 GTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAG 244808 Query 153965 GTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAG 154022 ||| | || | ||| |||||| || |||| ||||| | || | | | Sbjct 244807 GTCTCTGGCTCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAAC 244750 Query 154023 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCCGCCC 154079 | |||| |||||| ||||| | ||| | ||| | ||| || | | || |||||| Sbjct 244749 ACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCC 244690 Query 154080 TGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG 154139 || ||||||| ||| || | |||||| | || | || ||| || ||| ||| | | | Sbjct 244689 TGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAG 244630 Query 154140 GTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTA-----A 154194 |||||||||| | ||| | ||| || || | |||||| | | | Sbjct 244629 TTGCCGTTGGTGCCAGCGATGTAGCTTCC-----CGTCGATCGGATGCAGCTCACCGCCA 244575 Query 154195 CGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGC 154254 |||| || ||||| || |||| || ||| ||||| | ||| || |||||||| Sbjct 244574 CGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGC 244515 Query 154255 CGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCG 154314 | |||||||| ||||| | | ||||| ||| || ||| ||||| | | Sbjct 244514 CTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGG 244455 Query 154315 TTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374 | || || |||||||| ||| ||||| || ||| || | || | | || Sbjct 244454 TCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGT 244395 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCG-CCGTGAATGCCGAGCGCGACGCGCATGAGC 154433 | || |||||||| | ||||| || ||| ||||| || || | || || | ||||||| Sbjct 244394 AGGTCTCGATGGCAGCGTCGATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGC 244336 Query 154434 ATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGG 154493 ||||||||||| || ||||| ||| | || ||||||| || || || || Sbjct 244335 ATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGA 244276 Query 154494 GTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGG 154542 || ||| ||||||| | ||||| |||||| |||| | ||||| Sbjct 244275 GTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTCTGTCATAAATGATGG 244227 >seq722 Length=280156 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || |||||||| || || || || || || |||||||| | | Sbjct 192147 GACTCCTTCTGGATATTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 192088 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||||||| | ||| ||||| ||||| || |||||||| || ||| | |||| || | Sbjct 192087 AAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCC-TGAATCTTTGCCTTCAC 192029 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||| || | | ||||||||| | || | || || ||||| || ||||| Sbjct 192028 GTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTT 191969 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 191968 CACGAAAATCTGCAT 191954 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||| ||||| || || || || || || |||||||| | | Sbjct 192375 GACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 192316 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 ||||||| | ||| ||||| ||||| || ||||||| || ||| | |||| || | Sbjct 192315 AAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCC-TGAATCTTTGCCTTCAC 192257 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||| || | | ||||||||| | || | || || ||||| || ||||| Sbjct 192256 GTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGTCTTCCCAGTGAGGGTTTT 192197 Query 138600 TACAAAAATCTGCATGGCT 138618 || |||||||||||| || Sbjct 192196 CACGAAAATCTGCATGCCT 192178 >seq577 Length=410616 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||| | |||||||| | |||||| |||||| | || ||| ||||| ||||||||| | Sbjct 151943 TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGT 152002 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 || | || | ||||| ||||| ||| ||||||||||||| Sbjct 152003 TGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 152042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496150815399360