Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq86 203 3e-47
seq2100 118 1e-21
seq577 95.1 1e-14
>seq86
Length=659436
Score = 203 bits (224), Expect = 3e-47
Identities = 517/772 (67%), Gaps = 20/772 (3%)
Strand=Plus/Minus
Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103
||| |||||| ||| | ||||||| | ||| ||||| |||| || || | |
Sbjct 245760 AGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTG 245701
Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163
|| | |||||||||| ||| ||||| ||||||||||| || || ||||| || || |
Sbjct 245700 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 245641
Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCC 146223
|| || |||||| ||||| ||||| ||| |||||||||||| | ||||| |||
Sbjct 245640 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 245581
Query 146224 C---GTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAA 146280
| || || ||| | ||||| | || || || | | | |||||||
Sbjct 245580 TTCAGCAGCTT---CCAGTCCCACA---GGTCGGTCGGCGTCTTCTCCCACATGTCGTAC 245527
Query 146281 TGCATAGTGCCGCGGAACAGGGGGCTATTC-TCGTACGATTCATAAGGACCGTCGATCTT 146339
|| | |||| | | |||| | | ||||| | || || || ||| | |||
Sbjct 245526 TGGAGGATGCC-CTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTG 245469
Query 146340 -GGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGT 146398
||| ||||||||||| || ||||| || | ||| |||||||| |||| | ||
Sbjct 245468 CGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGT 245409
Query 146399 TGACGCTCCTGGCCTCCTCG-CTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGC 146456
||| || |||| || | | || ||| | || || ||| | || | ||||| |||||
Sbjct 245408 TGA-GCAGCTGGGCTTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCATCGGC 245351
Query 146457 GAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC 146516
|||||||| | |||| || | || | ||| |||||| || | || | |
Sbjct 245350 CAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGG 245291
Query 146517 AGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAA 146576
|| |||| |||| ||||||||||||||||||| || ||||| | || || |
Sbjct 245290 GACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGAC 245231
Query 146577 ACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGC 146636
|||| |||| || || | | | ||| |||| || |||||| |||
Sbjct 245230 GGAGGCCAGCTTCTTGAAGTCGAAAGTCC--GCTCTGGCGT-GACGTACATGTTGAGGGC 245174
Query 146637 GATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGC 146696
||| ||||||| ||| || ||||| |||||||||| | |||| ||| | ||| |
Sbjct 245173 GATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGT 245114
Query 146697 GCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGG 146756
||||||||||||||| |||||| |||||| || | ||||| || | ||||||| |
Sbjct 245113 GCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGC 245054
Query 146757 GTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATG 146808
|||||||||||||||||| || |||||||||| | || ||||| ||||
Sbjct 245053 GTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATG 245002
>seq2100
Length=111253
Score = 118 bits (130), Expect = 1e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || |||||||| |||||||| || || ||||| ||| || ||||| ||||||
Sbjct 23646 GTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 23705
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| |||||| ||||
Sbjct 23706 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 23765
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | ||||||||||| || ||
Sbjct 23766 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTC 23825
Query 127097 TTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 23826 TTGACAAAGATCTGCATG 23843
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||| || || ||||| ||| || ||||| ||| || ||||| |||||
Sbjct 27608 GTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 27667
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| ||| || |||
Sbjct 27668 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTA 27727
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | ||||||||||| || |||
Sbjct 27728 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGGGTT 27787
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 27788 TTCACAAAGATCTGCAT 27804
Score = 100 bits (110), Expect = 3e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||| |||||||| || ||||| || | ||||| ||| || ||||| |||||
Sbjct 27380 GTAGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 27439
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| ||| || ||||
Sbjct 27440 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 27499
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | ||||||||||| || ||
Sbjct 27500 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTC 27559
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 27560 TTGACGAAGATCTGCATG 27577
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || || ||||| ||| || ||||| |||||
Sbjct 23418 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 23477
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | ||||||||| || || ||||||||||| ||| ||| || ||||
Sbjct 23478 GCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 23537
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | || |||||||| || ||
Sbjct 23538 ACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 23597
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 23598 TTGACGAAGATCTGCATG 23615
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||| ||||| || || ||||| || | ||||| ||| || ||||| || |||
Sbjct 23190 GTAGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 23249
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || || || ||||||||||| ||| |||||| ||||
Sbjct 23250 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTG 23309
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | || || || | ||| | |||||||| || || ||
Sbjct 23310 ACGTTCTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAGTGAGGGTC 23369
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 23370 TTGACGAAGATCTGCATG 23387
>seq577
Length=410616
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 146686 ACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAAC 146745
|| ||||| | |||||| |||||| |||||||| |||||| ||||| ||||| | |
Sbjct 151951 ACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTCTTC 152010
Query 146746 TTGTTGCAGGGGTCCTTGTAGAGCATGTACGG 146777
||||||||| |||||||||||||||||||||
Sbjct 152011 CTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 152042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475393883645120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |