Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq86 143 3e-29
seq4 96.9 4e-15
seq577 95.1 1e-14
>seq86
Length=659436
Score = 143 bits (158), Expect = 3e-29
Identities = 880/1388 (63%), Gaps = 38/1388 (3%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| |||||
Sbjct 245700 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 245641
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| ||||||||||| |||| || |||||||| | | || || |||
Sbjct 245640 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 245581
Query 116023 TTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGG 116079
|| || | |||||| | || | | |||| | |||||||| || |||||
Sbjct 245580 TTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTC---TCCCACATGTCGTACTGG 245524
Query 116080 AGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137
||||| || | |||| ||||| ||||| ||||||| || ||||| | | |
Sbjct 245523 AGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGG 245466
Query 116138 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 116197
| | |||| |||| ||||| ||||| ||||| || || ||||| || || | || |
Sbjct 245465 CGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGA 245406
Query 116198 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257
|| ||| ||| | || |||| | || || || || |||| || ||||
Sbjct 245405 GCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGAC 245346
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT-TCGAGCGGTCTCCACG 116316
| ||||| |||| || || || | || | | | || ||| | ||| || ||
Sbjct 245345 CCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCG-GCTTCGGGGACC 245287
Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376
|| || | || | ||||| | | | || || ||||| || ||||| ||||
Sbjct 245286 GGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAG 245227
Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436
||||| | | | || ||| | || |||| |||| ||| | ||||||||
Sbjct 245226 GCCAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCGATG 245170
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| ||||| || || || | ||| ||||| |||||||| | | || || ||
Sbjct 245169 GAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAG 245110
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
| || | || |||||||||| ||||| || || ||| |||| || || |||
Sbjct 245109 AGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCC 245050
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACA 116616
||||||||||| || |||||||| || || || ||||||| || || || | ||| |
Sbjct 245049 TTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGC 244990
Query 116617 T-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 116675
| | ||| || || | || | | ||| |||| ||| || | ||||||||
Sbjct 244989 TGCTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTT 244931
Query 116676 CTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734
||| ||||| || ||| |||| ||| ||||| || || ||||| | | |
Sbjct 244930 CTCGAACTCCTCTCCC-CAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCAAGG 244872
Query 116735 ACCATTGACCACCCTCCTCA--ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792
|||| | || | ||| || | ||||||||| ||||| |||||||| | || |
Sbjct 244871 ACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTA 244814
Query 116793 GAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851
||| || || | | | ||| || | | || || || || ||||| ||||
Sbjct 244813 GAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAGT 244755
Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACGA 116907
| | | || |||||||||||||||||||| |||| | ||| || | |
Sbjct 244754 CGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTG- 244696
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967
|| |||||| || || | ||||| ||| | || | ||||| || | | ||
Sbjct 244695 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 244636
Query 116968 TCAGATTGGCCATTTGTCCCC-CGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026
| || | ||| || || || ||| | | || | || || | |
Sbjct 244635 TTGGAGTTGCCGTTGGTGCCAGCGATGTAGCTTCCCGTCGA-TCGGATGCAGCTCACCGC 244577
Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086
|| || || || || || |||| || || | ||||||| | | || || |||||||
Sbjct 244576 CACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGAT 244517
Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG 117146
|| ||||| ||| |||| | | || ||||||||||| |||| || |||| ||
Sbjct 244516 GCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC--GG 244459
Query 117147 T--GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 117203
| || || |||||||||||||| || | |||||| ||||| || | | ||||
Sbjct 244458 TTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGAG 244400
Query 117204 ATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCAT 117263
| ||||||||| | | ||| | |||||| |||||| || || | || |||| |||
Sbjct 244399 GTTGTAGGTCTCGATGGCAGCGTCGATGTCTCGCCCGTGGATCCCAACCGACACCCTCAT 244340
Query 117264 AAACATGT 117271
| |||||
Sbjct 244339 GAGCATGT 244332
>seq4
Length=1291530
Score = 96.9 bits (106), Expect = 4e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598
||||||| | | |||||||| || ||| || || ||||||||||| || | |||||
Sbjct 279436 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 279495
Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658
||| |||| | || ||| |||||||| |||||||| ||||||||||| ||||| |
Sbjct 279496 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAAATCCCCTCCACTGCTGCGAAAG 279555
Query 127659 CAAATAGACGCTC 127671
| | ||||||||
Sbjct 279556 CCACAAGACGCTC 279568
>seq577
Length=410616
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
||||||||| | ||||| | ||||| | ||||||||||||||| ||| ||||| |||||
Sbjct 150344 TAGATGTTGCTTGTGTACGCCTCAATGGACTCATTGTTACCCAGGATCTGGGCAGTGGAA 150403
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
||||||||||| || |||| || || |||||
Sbjct 150404 GCTGTGGGCATCGGGGCCAAAAGCAGACTGTT 150435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613369252906080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |