Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq86 197 2e-45
seq577 93.3 7e-14
>seq86
Length=659436
Score = 197 bits (218), Expect = 2e-45
Identities = 586/891 (66%), Gaps = 26/891 (3%)
Strand=Plus/Minus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
|||||| | ||| ||||| | ||| | ||| || | |||| | |||||||||
Sbjct 245128 CTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCT 245069
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||| | ||| || | ||||||||| | |||| | ||| | ||| | || |||| || ||
Sbjct 245068 CTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTC 245009
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAG 205058
| || || | ||| | | | |||| |||| |||||| | ||||||
Sbjct 245008 GATGA-TGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCAC---CCTCCCTTCCT 244953
Query 205059 ACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACC---GTACACGTCCATCAGCCCTG 205115
||| ||| | ||||| ||| | | || || || | || |||||| |||| |
Sbjct 244952 TCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCA---GCCCGG 244896
Query 205116 GACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACA 205175
|||| | |||||||||||| ||||| ||| | | | ||| |||| ||| ||||
Sbjct 244895 GACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACA 244836
Query 205176 GGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGT 205235
|||| |||||||| | |||| || || || | ||| || | || | ||| ||
Sbjct 244835 GGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGT 244776
Query 205236 TCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCC 205294
|||| |||| ||||| ||| || | | |||| ||||||||| || | ||| |||
Sbjct 244775 TCTTCTTCAGCTCCAG-GAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCG 244717
Query 205295 ATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACT 205354
| || || || |||||||| || |||||||| || ||||| | | |||| |||||
Sbjct 244716 AAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACT 244657
Query 205355 CGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCA 205414
| ||||||||| |||| ||||||| | | ||||| |||| |||| ||| | |
Sbjct 244656 CTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCAGCGATG---TAGCTTCCC 244600
Query 205415 GCCCTCACGTTGGAG---ATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCG 205471
| | | || || | ||| |||| |||||||||| |||||| || | |||
Sbjct 244599 GTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCG 244540
Query 205472 CACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531
|||| | ||| ||| |||||||||| ||||| |||||| || || | ||| ||
Sbjct 244539 CACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAG 244480
Query 205532 CACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTG 205591
|| | ||||| | |||||| || |||| |||||| || || ||||||| ||
Sbjct 244479 CAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTG 244420
Query 205592 AAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCA--GCACGCTCTCCAGATCGAAGCCGT 205649
|| | |||||| || |||||||||| | ||| || || | || ||||
Sbjct 244419 AACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCA-GC-GTCGATGTCTCGCCCGT 244362
Query 205650 GAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCA 205709
| || || | | | |||||||| | ||| || || | ||| ||| || |||| |
Sbjct 244361 GGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGA 244302
Query 205710 CCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGG 205760
||| ||||| |||| | ||| || || || | || |||||| |||
Sbjct 244301 TCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGG 244251
Score = 181 bits (200), Expect = 2e-40
Identities = 355/516 (69%), Gaps = 13/516 (3%)
Strand=Plus/Minus
Query 204100 CCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCA 204158
||||| | || ||||||| || ||||| | || || ||||||| ||||| |||
Sbjct 245828 CCTGAATGGATCCGTTGTTTGCAATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCGC 245769
Query 204159 ACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCC 204218
| |||| ||| | ||||| ||||||| |||||| || ||||||||||||||||
Sbjct 245768 GCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCC 245709
Query 204219 CTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAG 204278
|||||| | | |||| ||||| | | |||| | |||||||||||| | ||||| |
Sbjct 245708 TGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGG 245649
Query 204279 CGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGA 204338
||||| |||||||||||||| ||||| |||||| ||| | ||| |||| ||| ||
Sbjct 245648 CGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGA 245589
Query 204339 CCCTGCGCTTCAGAGAGGTCCAGTCGTGCA--TCGCACTGGGT-TTCACGCCCCACATGT 204395
| | |||||| ||||||| || ||| | | || ||| |||||||||
Sbjct 245588 TCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTC---TCCCACATGT 245532
Query 204396 CGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATA-AGGCTGATCC 204454
|| |||| | |||||| | |||||| || ||||| ||| ||| || ||| || |
Sbjct 245531 CGTACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGA-GC 245473
Query 204455 TCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGA 204514
||| | || || | ||| ||| ||| |||| | ||| |||||||| ||||||||
Sbjct 245472 TCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGG 245413
Query 204515 ACGTTTA--ATCTGGCGGCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGT 204572
| ||| | | ||| ||| || | | || |||| | | || || | || | |
Sbjct 245412 ATGTTGAGCAGCTG--GGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCAT 245355
Query 204573 CCGCCAAGCCCTGCACTCCGATTCCCAACGGTCTGT 204608
| |||| ||||| || ||||| || | ||| ||||
Sbjct 245354 CGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGT 245319
Score = 96.9 bits (106), Expect = 6e-15
Identities = 114/152 (75%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969
||| || ||| ||||| | ||||||| | |||||| | ||| || || || ||||
Sbjct 246096 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTCGGCTCAGCGATGT 246037
Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028
| |||||||| |||||||| ||||||||| ||||| || || ||||| ||||| | |
Sbjct 246036 GGATGTTCAGCGACTGGCTCTGGTCGATG-AAGGCTCCACGGTCTGCCGCCATCCTCAGC 245978
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060
| ||||||||| || || ||||| || || ||
Sbjct 245977 ACGGTCTTCTGGGAGATTTCCCAAACGGTTTT 245946
>seq577
Length=410616
Score = 93.3 bits (102), Expect = 7e-14
Identities = 111/148 (75%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973
|| ||| ||||| | ||||||| | ||||||| ||| || || || ||||||||
Sbjct 149106 CTTCCATCCGTAAAAGTGCATGCTGGTGAGTTTGCCGTAGTTTGGCTCAGCGATGTGAAT 149165
Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGG 204032
|||||||||||| || || |||||| ||| ||| |||||||| ||||| || | | ||
Sbjct 149166 GTTCAGAGACTGACTCTGATCGATG-TAGGTGCCACGATCTGCTGCCATCTTCAGGACGG 149224
Query 204033 TCTTCTGCGAAATCTCCCACACCGTCTT 204060
| ||||| || || ||||| || || ||
Sbjct 149225 TTTTCTGGGAGATTTCCCAAACTGTTTT 149252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794976409353280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |