Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 132 5e-26
seq990 129 6e-25
seq722 120 3e-22
seq4 96.9 3e-15
>seq2100
Length=111253
Score = 132 bits (146), Expect = 5e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||||||||||||| | || || || ||| |
Sbjct 23386 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTGGAGGTGGAACCCAGC 23327
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| || || ||||| || ||| | |||||
Sbjct 23326 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCA 23268
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | |||||||| ||||||||
Sbjct 23267 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTTCTGACTACAA 23208
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| || ||| | || || || | || || ||| |||| || ||||
Sbjct 23207 CATCCAGAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGCC 23158
Score = 129 bits (142), Expect = 6e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || || || ||||| ||||||||||||||| | || || ||| |
Sbjct 23846 AAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCC 23787
Query 38300 CACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| ||||| | || |||| | || | ||||||| || || ||||| || ||| | |
Sbjct 23786 CAGCGACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTG 23728
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||| |||| || | || || || |||||||| || | |||||||| ||||
Sbjct 23727 ACCAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACT 23668
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| |||||||| ||| | || || || | || || ||| |||| || |||
Sbjct 23667 ACAATATCCAAAAAGAATCCACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGC 23615
Score = 129 bits (142), Expect = 6e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||||||||||||| | || || ||| |||
Sbjct 27576 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTTGAGCCCAGT 27517
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || ||||| || ||| | |||||
Sbjct 27516 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCA 27458
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || || || |||||||| || | |||||||| ||||||||
Sbjct 27457 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTACAA 27398
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||||| ||| | || || || | || || ||| |||| || ||||
Sbjct 27397 CATCCAAAAAGAATCTACCCTCCACCTTGTTCTCCGTCTGAGGGGTGGCC 27348
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || || || ||||| ||||| ||||||||||||||| | || || ||| ||
Sbjct 27807 AAGATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCC 27748
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | |||| | || |||| || || ||||| || ||| | |||
Sbjct 27747 AGTGACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGAC 27688
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| |||| || | || || || |||||||| || | |||||||| |||||||
Sbjct 27687 CAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTAC 27628
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||| || ||| | || || || |||| || ||| | || || |||
Sbjct 27627 AACATCCAGAAAGAATCCACACTCCACCTGGTCCTCCGTCTCAGGGGTGGC 27577
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| |
Sbjct 23614 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 23555
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || ||||| || ||| | || ||
Sbjct 23554 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGATCA 23496
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || || || |||||||| || | |||||||| ||||||||
Sbjct 23495 GCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAA 23436
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || || || |||| || ||| | || || |||
Sbjct 23435 CATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTCAGGGGTGGC 23387
>seq990
Length=431866
Score = 129 bits (142), Expect = 6e-25
Identities = 101/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338
||||| || ||||||||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct 237869 ACCAGGTTCTCGTTGACGATGCCGTCGCTGGCGGCGAAGAAGGCCAACACGTGGGAGATG 237810
Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398
|| | |||||||| ||| |||| | |||||||| || ||| |||||||||||||||
Sbjct 237809 AAGTAGCGCTCGTCGTCCTTCAGGGACTCCCAGTGCTGCAGGTCTTTGGACAGGTCCACC 237750
Query 133399 T 133399
|
Sbjct 237749 T 237749
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/117 (79%), Gaps = 4/117 (3%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGA 133224
||||||||||||||| || | ||||| || ||||| | ||||||||||||||| ||
Sbjct 238063 GTAGGTGTCGATGAGCAGGCTG--TACATCTCAGAGTGGATGTTCTCCATGGCGATCTGG 238006
Query 133225 AAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACC 133281
|||||||| || |||| ||||| ||||||||| || || | ||| ||||| |||
Sbjct 238005 AAGCCGTAGAAACACCTGGCCTCTGTCACCTGCACCTCCTGCGTGAAGCGCTCCACC 237949
Score = 86.0 bits (94), Expect = 6e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 132931 ATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATG 132990
||||| ||||||||||| || | ||| ||||| ||||| | || || ||||| || |||
Sbjct 238449 ATGAGCTCGTTGCTGAAGGTTAGGCCAGGCATCAGGCCTCTCTTCTTCAGCCAGAAGATG 238390
Query 132991 GCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042
|||||||| || || ||||||| ||||| || || || || |||||||
Sbjct 238389 GCGGCGAACGAACCAGAGAAGAAGATTCCCTCCACAGCAGCAAAGGCCACCA 238338
>seq722
Length=280156
Score = 120 bits (132), Expect = 3e-22
Identities = 168/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||| ||||| || || ||||||||| | || || ||| |
Sbjct 191950 AAAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCC 192009
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| || | | | | |||| | || | ||| || | || ||||| || ||||| | |
Sbjct 192010 CAGTGATACCATTGAGAACG-TGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTG 192068
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||| |||| || | || || ||||||||||| || | |||||||| ||||
Sbjct 192069 ACCAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACT 192128
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| ||||| ||||| | || || || ||||||| || |||| || |||
Sbjct 192129 ACAATATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGAGGC 192181
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| ||||| || || || |||||| | || || ||| |||
Sbjct 192182 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACTATCACCCTGGAGGTGGAGCCCAGT 192241
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || | ||| || | || ||||| | ||||| | |||||
Sbjct 192242 GATACCATTGAGAACG-TGAAGGCAAAGATTCAGGATAAAGAAGACATTCCTCCTGACCA 192300
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || || ||||||||||| || | |||||||| ||||| ||
Sbjct 192301 GCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAAAA 192360
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| ||||| | || || || |||||||
Sbjct 192361 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 192393
>seq4
Length=1291530
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||||||| ||||||||||||| | | || | ||| ||||||||||| | || |
Sbjct 279436 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 279495
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| | || || ||||| ||| || ||||| | ||||| || || |||||||
Sbjct 279496 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAAATCCCCTCCACTGCTGCGAAAG 279555
Query 133037 CCACCAGGCGCTCGCC 133052
|||| || ||||| ||
Sbjct 279556 CCACAAGACGCTCCCC 279571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500060336145920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |