Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq722 95.1 5e-14 seq1664 86.0 2e-11 >seq722 Length=280156 Score = 95.1 bits (104), Expect = 5e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| || || || || || || || || | | Sbjct 191954 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 192013 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || ||| ||||| ||||| ||||| ||||||||||| || Sbjct 192014 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAG 192073 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | |||| || | || ||||| || |||||||| | || || |||| || ||| Sbjct 192074 CAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAT 192133 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || ||| | || | | ||||| ||| Sbjct 192134 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGAGGGGA 192178 Score = 91.5 bits (100), Expect = 6e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| || ||||| || || || || || | | Sbjct 192182 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACTATCACCCTGGAGGTGGAGCCCAGT 192241 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | || ||| ||||| ||||| |||| ||||||||||| || Sbjct 192242 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGACATTCCTCCTGACCAG 192301 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | |||| || | || ||||| || |||||||| | || || |||| || || Sbjct 192302 CAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAAAAC 192361 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || || ||| | || | | ||||| ||| Sbjct 192362 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCTGCCTGAGGGGA 192406 >seq1664 Length=147169 Score = 86.0 bits (94), Expect = 2e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| ||||||| |||||||||||||||| || ||||| ||||| | ||| |||| || Sbjct 19248 AGCAGTTGGAATCGATCTTGGAACCACCTACTCCTGTGTTGGTGTGTTCCAGCATGGCAA 19307 Query 450973 TGTAGAAATTATAGCAAATGACCAAGG 450999 || ||||| || || ||||||||||| Sbjct 19308 AGTTGAAATCATTGCCAATGACCAAGG 19334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975263053710704