Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq197 221 9e-52
seq1664 96.9 3e-14
>seq197
Length=465015
Score = 221 bits (244), Expect = 9e-52
Identities = 936/1469 (64%), Gaps = 16/1469 (1%)
Strand=Plus/Plus
Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308
||| ||| |||| | ||| || || || || ||||| || | |||||| || ||||||||
Sbjct 200136 TTTGTCAACGGCGGACACGTTTAGGATGCCGTTGGCGTCGATATCAAAGGTAACTTCAAT 200195
Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368
|| || || ||||| ||||||| || | || | | ||| | ||||| |||
Sbjct 200196 CTGTGGCACGCCTCTGGGAGCAGGAGGAAGACCAGAGAGCTCAAACTTCCCCAGGAGATT 200255
Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428
|| || || || | || ||||||||| ||| || || ||| | | || ||
Sbjct 200256 GTTGTCCTTTGTCATGGCTCTCTCACCCTCGTAAACCTGAATCAAGACTCCTGGCTGGTT 200315
Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGA-ATTGTTGTGTTTCTATCAA 517487
|||||| || || | || | |||| | | | | || || || ||||||| | |
Sbjct 200316 ATCTGAGTACGTGGAGAAGA-TCTGAGTCTGCTTCGTGGGGATGGTGGTGTTTCGCTTGA 200374
Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547
||| | ||||||| ||||| |||||||| | || || || | |||| ||||| |
Sbjct 200375 TAAGAGGTGTCATAACGCCACCGGCTGTTTCAATGCCCAGCGACAAGGGAGCCACATCCA 200434
Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607
|| | | || ||| | ||||| || | ||| | || ||||| ||||| | |
Sbjct 200435 GGAGCAGTAAATCTTGGACATTTTCTGAGGTGTCACCCATGAGGATAGCAGCTTGGACGG 200494
Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667
| |||||||| || || || |||||||| || | | | ||||| | | |||||||||
Sbjct 200495 CTGCACCATAGGCCACCGCCTCATCAGGGTTGATGCTCTTGTTTAGCTCTCTACCATTGA 200554
Query 517668 AAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727
| || | || || | | | || || || | | || || ||||||| ||||
Sbjct 200555 AGAAGTCCTGCAGGAGCTTTTGGATTTTGGGGATTCTTGTAGAGCCACCAACTAGGACAA 200614
Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787
||| || | || ||||||||||| || | ||| || | || ||||| || || |
Sbjct 200615 CTTCGTGGATCTTGGATTTATCCAGCTTAGCATCTTGTAGGGCCTTCTCAACTGGCTCCA 200674
Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847
| | || || | ||| || || || ||||| || || || || ||| |
Sbjct 200675 GTGTTCCCCTGAAGAGGTCCGAGTTGAGCTCCTCGAAGCGTGCCCTTGT--GATTGAGGT 200732
Query 517848 -TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGA 517905
|| || ||||| || || || | ||||||| ||||| | | ||||| || ||
Sbjct 200733 GTAAAAGTCAATGCCCTCAAAGAGTGAATCAATCTCAATGCTTGCCTGAGTGCTGGAGGA 200792
Query 517906 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT----TGCTG 517961
| | | || || | || || ||||| | ||||| | | ||| | | |||
Sbjct 200793 CAAGGTCCTCTTTGCTCTCTCGCAAGCTGTGCGCAGTCTCCTCACCGCTCTCTTGTTCTG 200852
Query 517962 ATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGAC 518021
|||| || | || | ||||| || || || || ||| | | || | |
Sbjct 200853 GCTGATG----TCCTTCTTGTGCTTTCTTTTAAACTCCTCCACAAAGTGGCTGACCATTC 200908
Query 518022 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 518081
| || |||||||| || || || | | || | || | || ||| | || | || |
Sbjct 200909 GGTTGTCAAAATCCTCCCCACCAAGGTGTGTGTCCCCGGCTGTGGCTTTCACCTCAAATA 200968
Query 518082 GTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141
|| || |||| | || | | || ||| || || ||||| | |||||| || |
Sbjct 200969 TGCCGTCCTCAATGGTCAGGATGGACACGTCAAAAGTGCCTCCACCAAGATCAAAGATGA 201028
Query 518142 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201
| | || ||| || | ||| ||||| || || |||| || || || || |
Sbjct 201029 GGATGTTGCGCTCTCCTCTTTTGCCTTTGTCAAGGCCGTAGGCAATGGCTGCCGCTGTGG 201088
Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261
| ||||| || || | | |||||| || || | || ||| ||||| || |||||||
Sbjct 201089 GCTCATTTATGATGCGGAGAACATTTAGTCCGGAGATCACTCCAGCATCCTTTGTGGCTT 201148
Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTA 518320
| ||||| ||||| ||||| || || || || || || || |||| | || ||| |
Sbjct 201149 GCCTTTGGGAATCATTAAAGTAAGCTGGCACTGTGATGACCGCATTCGACACCCTCTGTC 201208
Query 518321 CCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 518380
||| | | || || ||| | |||||||| | | ||| || ||||| | |||
Sbjct 201209 CCAGAA-AGGCCTCGGCTATTTCTCTCATTTTAACCAGGACCATCGAGGAAATCTCTTCA 201267
Query 518381 GGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACA 518440
|| | || ||| ||| || |||| || | | | || || |
Sbjct 201268 GGACAGAATGTCTTAATTTCTCCTTTATATTCCACCTGGACTTTGGGCTTTCCGTTGTCG 201327
Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500
|| || || || || |||||| |||||| || || || || |||||| ||| |
Sbjct 201328 TTGATCACCTTGAAGGGCCAGAGTTTCATGTCAGACTGGACCACCAGGTCATCAAACCTT 201387
Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATAT 518560
|| ||||| | ||||| |||||||| || || ||||| || || || ||| |||| |
Sbjct 201388 CTTCCAATGAGCCGTTTGGCATCAAAGATTGTGTTGGTGGGGTTCATGGCAACTTGGTTC 201447
Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620
||||| |||||||| || || ||||| || ||||| | || || ||||||||
Sbjct 201448 TTGGCAGCATCTCCGATGAGCCTCTCTGTGTCAGTAAAGGCCACGTAGCTGGGAGTTGTC 201507
Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680
| || ||||||||||| ||||||||||| ||||| |||| || | || || ||||||
Sbjct 201508 CTGTTGCCTTGATCATTGGCAATAATTTCCACTTTTCCATGCTGGAAGACCCCGACACAA 201567
Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAAT 518709
| || || || | ||| || |||||
Sbjct 201568 GAGTAGGTGGTGCCCAGATCGATGCCAAT 201596
>seq1664
Length=147169
Score = 96.9 bits (106), Expect = 3e-14
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||||| || ||||| || || || ||| | |||| |||||||| |||||||||||
Sbjct 19438 CAAAAACTGTGTTGGTAGGGTTCATGGCAACCTGATTCTTGGCTGCGTCTCCAATCAGTC 19379
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
|| || ||||| || | ||||| || || || | || ||||| ||||| ||||
Sbjct 19378 TCTCGGTATCTGTGAAAGCCACATAGCTGGGTGTGGTCCTGTTGCCTTGGTCATTGGCAA 19319
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| ||||||||||| |||| || | ||||| ||||| | || ||||| | ||| |
Sbjct 19318 TGATTTCAACTTTGCCATGCTGGAACACACCAACACAGGAGTAGGTGGTTCCAAGATCGA 19259
Query 518703 TACCAA 518708
| ||||
Sbjct 19258 TTCCAA 19253
Score = 95.1 bits (104), Expect = 9e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || || || ||||| |||| |||||| |||||||||||||| || || | |||||||
Sbjct 20072 TTCTTGTCCAGCCCATAGGCAATAGCAGCTGCAGTTGGTTCATTGATTATACGCAAAACA 20013
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| || |||| || | || ||||| || ||||| || | || || || || || ||
Sbjct 20012 TTGAGGCCAGAGATGGTGCCAGCATCCTTGGTGGCCTGACGCTGGGAGTCATTGAAGTAA 19953
Query 518285 GCAGGAACAGTAATAACGGCAT 518306
||||| || || || || ||||
Sbjct 19952 GCAGGTACTGTGATCACAGCAT 19931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3779929776187528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |