Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 129 4e-25
seq722 104 2e-17
>seq2100
Length=111253
Score = 129 bits (142), Expect = 4e-25
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | |||| ||||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 27596 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 27655
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| ||||||||||| || || | |||||||| | || | |||||||| ||
Sbjct 27656 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 27715
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| || || || || || | |||| || ||| || || | ||| |||||||
Sbjct 27716 ATCTTGGCCTTAAC--ATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTT 27773
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| || ||||| || ||||||||||||||||| ||
Sbjct 27774 TGCCGGTGAGGGTTTTCACAAAGATCTGCATCTT 27807
Score = 127 bits (140), Expect = 1e-24
Identities = 172/240 (72%), Gaps = 5/240 (2%)
Strand=Plus/Plus
Query 34747 AATCATTTCCT-----CCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAAT 34801
|||||||| || ||||||| | | ||| | ||| | || |||||| || ||
Sbjct 27337 AATCATTTACTGGCCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTTTGGAT 27396
Query 34802 GTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTG 34861
||| ||||| |||||| | || |||| |||||||| ||||||||||| || || | ||
Sbjct 27397 GTTGTAGTCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTG 27456
Query 34862 CTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTC 34921
|||||| | || | |||||||| || ||||| |||||| | || | ||
Sbjct 27457 CTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC 27516
Query 34922 ACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || |||||| || | ||| |||||||| || ||||| ||||| || |||||||||||
Sbjct 27517 ACTGGGCTCAACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 27576
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 23406 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 23465
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| ||||||||||| || || | ||||| || | || | |||||||| ||
Sbjct 23466 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTATCCTGG 23525
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | || |||||| || | ||| ||||| ||
Sbjct 23526 ATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTG 23585
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| ||||| || |||||||||||
Sbjct 23586 CCGGTGAGGGTCTTGACGAAGATCTGCAT 23614
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | | ||| | ||| | ||| |||||| || || || ||||| ||
Sbjct 23616 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGAC 23675
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| ||||| ||||| || || | |||||||| | ||
Sbjct 23676 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 23735
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| |||||||| || || || |||||| | || | || | || ||| ||
Sbjct 23736 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACC 23795
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| | ||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct 23796 TCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTT 23845
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||| ||||| ||||| |||||| | || |||| |||||||| || || |||||
Sbjct 23195 TTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAA 23254
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | |||||||| || || || ||||||
Sbjct 23255 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTT 23314
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || | || || || || | ||| |||||||| || ||||| ||||| ||
Sbjct 23315 CTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAGTGAGGGTCTTGAC 23374
Query 34970 AAAGATCTGCAT 34981
|||||||||||
Sbjct 23375 GAAGATCTGCAT 23386
>seq722
Length=280156
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||||| | | |||| ||| | ||| || ||||| || || ||||||||
Sbjct 192180 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 192121
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| ||||||||||| || ||||| ||||| | |||||||| | ||
Sbjct 192120 AGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGA 192061
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || || || || |||||| || ||| | || | |||| || ||| ||
Sbjct 192060 ATGCCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACC 192001
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| | ||| ||||| || || ||||| || ||||| || |||||||| ||
Sbjct 192000 TCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 191951
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813
||||||||||| | | |||| ||| | ||| || ||||| ||||| ||||||||
Sbjct 192409 TCCTCCCCTCAGGCAGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGA 192350
Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873
||| | || |||| ||||||||||| || ||||| ||||| | |||||||| | ||
Sbjct 192349 CAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGG 192290
Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933
| | || || || |||||| || ||| | || | |||| || ||| ||
Sbjct 192289 AATGTCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCAC 192230
Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| || || || || ||||| || ||||| || ||||||||
Sbjct 192229 CTCCAGGGTGATAGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 192182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324562430981664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |