Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq197 174 1e-37
seq722 114 1e-19
seq1664 102 7e-16
seq2100 98.7 8e-15
seq277 95.1 1e-13
seq166 91.5 1e-12
>seq197
Length=465015
Score = 174 bits (192), Expect = 1e-37
Identities = 401/594 (68%), Gaps = 14/594 (2%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| || || ||| | || ||||| || |||||| || || | || |||| |||||
Sbjct 201596 ATTGGCATCGATCTGGGCACCACCTACTCTTGTGTCGGGGTCTTCCAGCATGGAAAAGTG 201537
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
||||||||||||||||||||||| ||||| || ||||| || || | || || ||
Sbjct 201536 GAAATTATTGCCAATGATCAAGGCAACAGGACAACTCCCAGCTACGTGGCCTTTACTGAC 201477
Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACCAAT 550171
|| || | | || ||||| || || | ||| |||| || || || |||||
Sbjct 201476 ACAGAGAGGCTCATCGGAGATGCTGCCAAGAACCAAGTTGCCA-TG--AACCCCACCAAC 201420
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| || |||||||| ||||| | ||||||||||| ||| |||| | || ||| |
Sbjct 201419 ACAATCTTTGATGCCAAACGGCTCATTGGAAGAAGGTTTGATGACCTGGTGGTCCAGTCT 201360
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
|| ||||| | ||||| ||| | | | || | ||||| || | | | || |
Sbjct 201359 GACATGAAACTCTGGCCCTTCAAGGTGATCAACGACAACGGAAAGCC-CAAAGTCCAGGT 201301
Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| | || ||||| |||| ||| | || ||| | ||||| || ||||| |
Sbjct 201300 GGAAT-ATAAAGGAGAAATTAAGACATTCTGTCCTGAAGAGATTTCCTCGATGGTCCTGG 201242
Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409
| ||||||| | ||| |||| || ||| | || || || || |||| || || |
Sbjct 201241 TTAAAATGAGAGAAATAGCCGAGGCCTTTCTGGGACAGAGGGTGTCGAATGCGGTCATCA 201182
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
| || ||||| || |||||||| || ||| | ||||| || || ||||||||| ||
Sbjct 201181 CAGTGCCAGCTTACTTTAATGATTCCCAAAGGCAAGCCACAAAGGATGCTGGAGTGATCT 201122
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
| ||||| |||||||| || || || ||||| || || || || || |||| || || |
Sbjct 201121 CCGGACTAAATGTTCTCCGCATCATAAATGAGCCCACAGCGGCAGCCATTGCCTACGGCC 201062
Query 550530 TTGATAAA--CATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581
|||| ||| || || || ||| | || | |||||||||||| ||| ||
Sbjct 201061 TTGACAAAGGCA-AAAGA-GGAGAGCGCAACATCCTCATCTTTGATCTTGGTGG 201010
Score = 170 bits (188), Expect = 2e-36
Identities = 441/667 (66%), Gaps = 10/667 (1%)
Strand=Plus/Minus
Query 551913 ACTGCTTGCGAAAGAGCCAA-ACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971
|| |||||||| ||||| || | || || | || || | ||||| | | ||||| |
Sbjct 200822 ACAGCTTGCGAGAGAGCAAAGAGGACCT-TGTCCTCCAGCACTCAGGCAAGCATTGAGAT 200764
Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031
|||||| | |||||||| ||||| | | | || | || | ||||| || || ||
Sbjct 200763 TGATTCACTCTTTGAGGGCATTGACTTTTACACCTCAATCACAAGGGCACGCTTCGAGGA 200704
Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTC 552091
| || || ||||| || |||| | || ||||| || | | || |||| |
Sbjct 200703 GCTCAACTCGGACCTCTTCAGGGGAACACTGGAGCCAGTTGAGAAGGCCCTACAAGATGC 200644
Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151
||| | ||||||||||| | || ||| |||| || |||||||| ||||||||||| ||
Sbjct 200643 TAAGCTGGATAAATCCAAGATCCACGAAGTTGTCCTAGTTGGTGGCTCTACAAGAATCCC 200584
Query 552152 TAAAATTCGCGAAATG----TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG 552207
||||| | ||| | | || ||| |||||||||| | | |||| | ||
Sbjct 200583 CAAAAT---CCAAAAGCTCCTGCAGGACTT-CTTCAATGGTAGAGAGCTAAACAAGAGCA 200528
Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267
| || || |||||||| || ||||||||||| || | ||||| ||||| || ||
Sbjct 200527 TCAACCCTGATGAGGCGGTGGCCTATGGTGCAGCCGTCCAAGCTGCTATCCTCATGGGTG 200468
Query 552268 AAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327
| || ||||| | ||| || | | || | ||||| |||| | || || ||
Sbjct 200467 ACACCTCAGAAAATGTCCAAGATTTACTGCTCCTGGATGTGGCTCCCTTGTCGCTGGGCA 200408
Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387
| ||||||| || || ||||||| ||||||| | |||| || || || || |
Sbjct 200407 TTGAAACAGCCGGTGGCGTTATGACACCTCTTATCAAGCGAAACACCACCATCCCCACGA 200348
Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447
| | ||| | || || ||||| |||||||| || | | || ||||| |||
Sbjct 200347 AGCAGACTCAGATCTTCTCCACGTACTCAGATAACCAGCCAGGAGTCTTGATTCAGGTTT 200288
Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507
|| || || ||| | || || || || |||| || || | ||| | | |
Sbjct 200287 ACGAGGGTGAGAGAGCCATGACAAAGGACAACAATCTCCTGGGGAAGTTTGAGCTCTCTG 200228
Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567
|| ||||||||||||| | || || || || ||||||||||| || |||||||| ||||
Sbjct 200227 GTCTTCCTCCTGCTCCCAGAGGCGTGCCACAGATTGAAGTTACCTTTGATATCGACGCCA 200168
Query 552568 ATGGAAT 552574
| || ||
Sbjct 200167 ACGGCAT 200161
>seq722
Length=280156
Score = 114 bits (126), Expect = 1e-19
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
||| || ||||| || || || ||||| ||| | ||| |||||||| || | ||
Sbjct 192175 CCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGG--ATATTGTAGTCCGACAGG 192118
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || ||||| || ||||| || || || ||||| |||||||||||
Sbjct 192117 GTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATG 192058
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429
||||||||||| ||||| ||| || || |||||| |||||| || | | || ||
Sbjct 192057 CCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTG-GGCTCCACCTC 191999
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | || || ||||| || ||||| |||||||| |||||
Sbjct 191998 CAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 191954
Score = 105 bits (116), Expect = 5e-17
Identities = 119/157 (76%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378
|||||| || ||||| || ||||| || || || ||||| ||||||||||| |||||||
Sbjct 192337 ATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTT 192278
Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAA 563437
||| ||||| ||| || || |||||| |||||| || | | || || || || |
Sbjct 192277 ATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTG-GGCTCCACCTCCAGGGTGA 192219
Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || ||||| || ||||| |||||||| |||||
Sbjct 192218 TAGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 192182
>seq1664
Length=147169
Score = 102 bits (112), Expect = 7e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || || || ||||| || || || |||||||| || ||||| || || || ||||
Sbjct 19931 ATGCTGTGATCACAGTACCTGCTTACTTCAATGACTCCCAGCGTCAGGCCACCAAGGATG 19990
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| || |||| || |||||| | ||||| ||||||||||| ||||| |||||
Sbjct 19991 CTGGCACCATCTCTGGCCTCAATGTTTTGCGTATAATCAATGAACCAACTGCAGCTGCTA 20050
Query 550518 TTGCATATGGACTTGATAA 550536
|||| ||||| || || ||
Sbjct 20051 TTGCCTATGGGCTGGACAA 20069
Score = 95.1 bits (104), Expect = 1e-13
Identities = 137/188 (73%), Gaps = 8/188 (4%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || ||| | |||||||| || ||||||||||| | || |||| |||||||||
Sbjct 19255 GGAATCGATCTTGGAACCACCTACTCCTGTGTTGGTGTGTTCCAGCATGGCAAAGTTGAA 19314
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
|| ||||||||||| ||||| ||||| || || || ||||| ||||||| || ||
Sbjct 19315 ATCATTGCCAATGACCAAGGCAACAGGACCACACCCAGCTATGTGGCTTTCACAGATACC 19374
Query 550118 GA-ACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACCAATAC 550173
|| | | | | |||| || ||||| || |||| |||| || || |||||||| ||
Sbjct 19375 GAGAGACTGA-TTGGAGACGCAGCCAAGAATCAGGTTGCCA-TG--AACCCTACCAACAC 19430
Query 550174 TATTTTTG 550181
||||||
Sbjct 19431 AGTTTTTG 19438
Score = 89.7 bits (98), Expect = 4e-12
Identities = 76/94 (81%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565
||| |||||||||||||||||||| || || || ||||| || || |||||||| |||||
Sbjct 21157 AGGAATTCCTCCTGCTCCTCGTGGCGTTCCACAGATTGAGGTGACATTCGATATTGATGC 21216
Query 552566 CAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599
||||| || ||||||| ||||| ||| |||
Sbjct 21217 TAATGGCATCATGAATGTCTCTGCTGTTGACAAA 21250
>seq2100
Length=111253
Score = 98.7 bits (108), Expect = 8e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| |||||||| ||||| || |||||| |||||| || ||||| |||| || ||
Sbjct 27355 CCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGGGT 27414
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| |||||| || || ||||||||||| || || || ||||| ||||| || || ||
Sbjct 27415 GCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 27474
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
|| ||||| || || || || || |||||| || ||| || | | || ||
Sbjct 27475 CTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAG 27534
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | ||||| || || || || || ||||| || |||||
Sbjct 27535 GGTGATGGTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 27576
Score = 87.8 bits (96), Expect = 1e-11
Identities = 155/224 (69%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310
|||||||||||| || || |||||||| ||| | ||| || ||||| |||| ||
Sbjct 23393 CCTGAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGG--ATGTTGTAGTCAGACAGG 23450
Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370
|| | |||||| || || ||||||||||| || || || ||||||||||| || ||
Sbjct 23451 GTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCAGGGGGGATG 23510
Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCG 563430
|| || ||||| || || || || || |||||| || || || | | ||
Sbjct 23511 CCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCC 23570
Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | || || || || || || || ||||| || |||||
Sbjct 23571 AGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 23614
>seq277
Length=640189
Score = 95.1 bits (104), Expect = 1e-13
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | |||||||| || || || |||||||| || || || || || |||||||
Sbjct 208453 ATGCCGTGGTGACTGTACCTGCCTACTTCAATGACTCTCAGCGCCAGGCCACCAAAGATG 208394
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
|||| ||| |||| || |||||||| ||||| || || || || || ||||||||
Sbjct 208393 CTGGGACCATTTCTGGGCTCAATGTTCTGCGTATCATTAACGAGCCAACAGCTGCTGCCA 208334
Query 550518 TTGCATATGG 550527
|||| |||||
Sbjct 208333 TTGCTTATGG 208324
>seq166
Length=757612
Score = 91.5 bits (100), Expect = 1e-12
Identities = 102/135 (76%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
||||||| || || || || || || || |||||||| || |||||||| || ||||| |
Sbjct 653462 ATGCAGTTATCACAGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGACG 653403
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| || || | || || ||||| ||||| |||||||||||||| || || || ||
Sbjct 653402 CCGGTACCATCTCCGGCCTCAATGTGCTTCGCATTATCAATGAACCCACAGCCGCAGCCA 653343
Query 550518 TTGCATATGGACTTG 550532
||||||| || ||||
Sbjct 653342 TTGCATACGG-CTTG 653329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028344713434120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |