Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq60 145 6e-30
seq4888 105 5e-18
>seq60
Length=641354
Score = 145 bits (160), Expect = 6e-30
Identities = 133/168 (79%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||||||| |||||||||| || || |||||||| ||||| || ||||| |||||||| ||
Sbjct 475684 CATGTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATC 475625
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
||||| ||||| | ||||||| ||||||| ||||| | ||| |||||||| ||
Sbjct 475624 CCCCTCCTCCCTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATC 475565
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
||||||||| || || ||||| || ||||| |||| ||||| || ||
Sbjct 475564 CCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGGCATTTGTTGATCC 475517
Score = 132 bits (146), Expect = 4e-26
Identities = 127/163 (78%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || || | ||| || |||||||| ||||| || | ||||||||||||||| || ||
Sbjct 476582 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 476523
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || || |||||||| | || | |||||| |||||||| || ||||| |||||||
Sbjct 476522 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCAG 476463
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGA 30031
||||| |||||||| | || ||||| || || || |||||||
Sbjct 476462 ACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGA 476420
Score = 82.4 bits (90), Expect = 6e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100
||||||||||||||||||||| |||||| || | |||||| ||||| ||| ||||| ||
Sbjct 476337 CTTTGGGGTTCCAGGCGCACATGATGATCCGTCGGTCTTCCGGGTTTTTCTTGATGGTGT 476278
Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCC 30128
| | | |||||| ||||| || || ||
Sbjct 476277 CGATGATGTTTTGTAGCTGGTCGACACC 476250
>seq4888
Length=17061
Score = 105 bits (116), Expect = 5e-18
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
||||||||||||||| | ||| |||||| || |||| || || ||||| || ||||| ||
Sbjct 10818 CTCCCTGCTGAGGACGATGTTGATCCTGCCTTTCAGTGGCCTGTTCTTCTCTGGGATTGA 10877
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|||||| ||||| || ||||| |||||||| |||| | |||||
Sbjct 10878 GAACCAGGTCTTCCTGCCCATGATCACCACATTCTTCCTGCCT 10920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408528019274324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |