Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq86 365 8e-96
seq990 105 1e-17
seq577 93.3 8e-14
seq4 84.2 4e-11
>seq86
Length=659436
Score = 365 bits (404), Expect = 8e-96
Identities = 1035/1589 (65%), Gaps = 47/1589 (3%)
Strand=Plus/Minus
Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124
|||||| || |||| || || | ||| ||| |||||| | ||| ||| || |
Sbjct 245791 CATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGAT 245732
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
||||| ||||| || |||||||| | ||| | ||| ||| ||| ||||||
Sbjct 245731 CTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGA 245672
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
||||||||||||||||||||| || ||| || ||||||||||| |||| |||||| ||
Sbjct 245671 CTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCT 245612
Query 221245 GTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACAGTGTCCTCC 221304
||| | || ||| | | ||| || ||||| |||||||| ||
Sbjct 245611 GTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCA--------- 245561
Query 221305 CAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGACACCGGACT 221364
|||||| ||| || ||
Sbjct 245560 CAGGTCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGA 245501
Query 221365 CCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGG 221423
|| ||||| | ||||||||| ||| | | |||| | |||| | || || ||||
Sbjct 245500 GCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCA-GCTGGCCTCCAGGG 245442
Query 221424 CAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGA 221483
| ||||||||||||||||| |||||| ||||||| || ||| ||||| ||
Sbjct 245441 CGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGA 245382
Query 221484 AGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543
| || |||| || ||| | |||||||| ||||| || ||||| ||||| ||||
Sbjct 245381 ACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCC 245322
Query 221544 TGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGAT 221603
|||| | | ||||||| | | ||||| || || || || |||||| |||||| | |
Sbjct 245321 TGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCT 245262
Query 221604 TGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCA 221663
|||||||||| ||| || || || || |||||||| | | |||
Sbjct 245261 TGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAA----- 245207
Query 221664 ACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTAC 221723
| || | | | |||| | ||| ||| ||||| | | ||||||||| |
Sbjct 245206 AGTCCGCTCTGGCGTGACGT------ACAT----GTTGAGGGCGATGGAGGCCAGGTTGC 245157
Query 221724 ACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACT 221783
| |||||||||||||||||| |||| |||| | | |||||| |||||||||||||| |
Sbjct 245156 AGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATT 245097
Query 221784 TGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAA 221843
||||||| ||||||| | || || ||| | ||| ||||||||||||||||||
Sbjct 245096 TGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGT 245037
Query 221844 AGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTC 221902
|||| || || || ||| | | | | || || |||||| | ||| || ||
Sbjct 245036 AGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGCTG-CTGCGCCTTC 244978
Query 221903 ACCGTCCTCTTGACTGCACCCTCGGT--CTTTTCATACCCGGTATAGAGCATGTCAAACT 221960
||| |||||| ||||||| | ||| ||||| | ||| |||||| | || ||||
Sbjct 244977 ACCACCCTCTT-----CACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACT 244923
Query 221961 TTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCT 222020
|| || | ||||||||| || |||||| | ||||||||||| ||||| ||
Sbjct 244922 CCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCAAGGACCAGTCCT 244863
Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080
|||| | || |||| |||||| |||||||||||||||| || | || || ||||
Sbjct 244862 GGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTC 244803
Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140
||| | |||||||||| || |||| ||| |||| |||| || || || | |||
Sbjct 244802 TGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGA 244743
Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200
||||||||| ||||| || | ||| | || ||||||| ||||||||| ||||| || |
Sbjct 244742 AGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGA 244683
Query 222201 CCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGT 222260
| | || |||| | | | || |||| |||| ||||||||| ||||
Sbjct 244682 CGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGT 244623
Query 222261 TGGTGCCCTTAATGTACGCACCGCCGGCCCTC--AGGTTACTGGCAGACATGCCGATACC 222318
||||||| ||||| || | ||| | || | | || | | || |||||| ||
Sbjct 244622 TGGTGCCAGCGATGTA-GCTTC-CCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCC 244565
Query 222319 ACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGA 222378
|| ||| || || || | ||||| ||| || ||||| |||||| || ||
Sbjct 244564 GCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCT 244505
Query 222379 GTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTT 222438
||| ||||| | | | ||||| || || |||| ||| | | ||| | ||||||
Sbjct 244504 GTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTT 244445
Query 222439 AAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTAC 222498
|| || || ||| |||||| || || | | |||| || | ||| ||||| |
Sbjct 244444 GAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGAT 244385
Query 222499 GACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGG 222558
| | | |||||| |||||| ||| | | |||||| ||||| ||| ||
Sbjct 244384 GGCAGCGTCGATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 244325
Query 222559 CCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAA 222615
|| || |||| ||| | || || |||||||| || ||||||||||||||
Sbjct 244324 CCGCTCGGCCAC-TTTCCCGTTGATCT--TCAGCAGGTAGGAGCGCTCCAGAGTCTTGAA 244268
Query 222616 CCCAAAGTAGTTG-AGGTCAAAGTCTCTG 222643
|| ||| ||||| ||| ||| ||||||
Sbjct 244267 ACCGAAGAAGTTGTAGGAGAAA-TCTCTG 244240
>seq990
Length=431866
Score = 105 bits (116), Expect = 1e-17
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| |||||||||||||||||||| ||||| ||| |||||||| || ||||||||||
Sbjct 238338 TGGTGGCCTTTGCTGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCT 238397
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGG 26002
|||| ||| ||| || ||||| || || ||| ||||||||||||||| | |
Sbjct 238398 GGCTGAAGAAGAGAGGCCTGATGCCTGGCCTAACCTTCAGCAACGAGCTCATCAGTCGAG 238457
Query 26003 ACGAGG 26008
||||||
Sbjct 238458 ACGAGG 238463
Score = 89.7 bits (98), Expect = 1e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
|||||||||||||| ||||| ||||| || |||| |||||||||||||||||||| |||
Sbjct 239242 AACCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAG 239301
Query 26305 AGGGTCGGCGACTATCA 26321
||||||| || || ||
Sbjct 239302 CGGGTCGGGGAGTACCA 239318
>seq577
Length=410616
Score = 93.3 bits (102), Expect = 8e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096
|| ||| |||||||| || ||||||| || || || ||||||| | |||||| ||
Sbjct 152404 CTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTCTCTGCTCTTC 152463
Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156
|| |||| ||| |||| |||||||||||||| | |||||| ||||||||||||||
Sbjct 152464 TTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCCACGGCTCCAG 152523
Query 222157 ATAGAC 222162
|| ||
Sbjct 152524 GTACAC 152529
>seq4
Length=1291530
Score = 84.2 bits (92), Expect = 4e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| || || || || || || |||||||| || || ||| || || || ||
Sbjct 279571 GGGGAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATTTTCTTCTCAGGCTCATTCGCT 279512
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|| |||| |||||| ||| ||| || |||||| || || || |||||||| |||
Sbjct 279511 GCTATCTACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTC 279452
Query 25993 ATCAGCAGGGACGAGG 26008
|| |||||||||||||
Sbjct 279451 ATTAGCAGGGACGAGG 279436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928635949246720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |