Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq86 149 7e-31
seq4 87.8 2e-12
seq577 86.0 7e-12
>seq86
Length=659436
Score = 149 bits (164), Expect = 7e-31
Identities = 950/1500 (63%), Gaps = 60/1500 (4%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||| |||| | | || ||||||||| |||||| || ||| |
Sbjct 244325 CCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATCGACGCTGCC 244384
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || |||| | | || ||||| ||||| | || ||||||||
Sbjct 244385 ATCGAGACCTACAACCTCCTGTCGGAGAAGTG-GTTCACCCACGCCTCTCCGACCCTCTT 244443
Query 75331 CAATGCTGGTAC--ACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||| || || || ||| | |||||| ||||||| |||||||| || ||| |||||
Sbjct 244444 CAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGAC 244501
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| ||| | || ||||| | || || | | |||| |||| || || |||| |||
Sbjct 244502 GACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCT 244561
Query 75449 GGGGGTATTGG---------GATGCACATCC-AT-GATGTGAGAGCCAATAAATCTCGTA 75497
|| || || || || ||||| || || | || ||| || ||| |
Sbjct 244562 GGCGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGA-AGC---TACATCGC--- 244614
Query 75498 TTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCA 75557
|| || || || | || | || | | || ||||| | || | ||| ||
Sbjct 244615 ----TGGCACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACA 244670
Query 75558 CAGCGCGCTATGTAAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTAC 75610
| || ||||| | || | | ||||| | |||| ||| || |||| | |||
Sbjct 244671 CGGCTCGCTACG----TCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTAC 244726
Query 75611 TTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGA 75669
||||||| ||||| ||| | | || ||||| ||| | | || ||| ||| |
Sbjct 244727 CTGGAACCGTGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGA-AGAACACAGGAAA 244785
Query 75670 CGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAA 75729
|| ||| | ||||| || || | || ||||||| || ||||| ||||||||
Sbjct 244786 GGAGGAGCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAA 244845
Query 75730 GCGGGT--TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTC 75787
| | || ||| | || | ||||| | | ||||| | || || || ||
Sbjct 244846 GAGAGTGGAGAGCAACCAGG--ACTGGTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTG 244903
Query 75788 TCCGA-CGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAG 75846
||| || | ||| |||||||| || |||||||| | ||||| |||| || ||
Sbjct 244904 GACGAGTGCTG-GGGAGAGGAGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAG 244962
Query 75847 AGCCAATGCGACTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGG 75905
| || | | || || ||| | | | ||| | || || || | || ||||| |
Sbjct 244963 GGTGAA-GAGGGTGGTGAAGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCG 245021
Query 75906 AGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGA 75965
| || || || || || ||||| |||||||| ||||| |||| |||||| ||||| |||
Sbjct 245022 AAACCGGGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGA 245081
Query 75966 ATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGG 76025
| |||| || ||||| || || || ||||| || | | |||||||| ||||
Sbjct 245082 ACCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGG 245141
Query 76026 ATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGA 76085
| ||| ||| || ||||| |||| || |||||||| | ||| |||| ||||
Sbjct 245142 ACGAGGTGGCCGTCTGCAACCTGGCCTCCATCGCCCTCAACATGTACGTCACGCCAGAG- 245200
Query 76086 CTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAA 76145
|| ||||| || | | || || |||| ||| | | ||||| || |
Sbjct 245201 --CGGACTTTCGACTTCAAGAAGCTGGCCTCCGTCACCAAGGTAATCGTGAAAAACCTCA 245258
Query 76146 ACCGAGTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGA 76204
|| |||| |||| || | || || || || || | | ||| || | |||
Sbjct 245259 ACAAGATCATCGACATCAACTACTACCCGGTCCCCGAAGCCGAG-ACGTCCAACAAGCGC 245317
Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTAC 76264
||||| || || || | || || || ||||| || |||| || || || || |
Sbjct 245318 CACAGGCCGATCGGGATCGGCGTCCAGGGTCTGGCCGATGCCTTCATCCTGATGCGACAT 245377
Query 76265 GCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCAC 76324
| || || |||||| || | | || | ||||| || ||||| || |||
Sbjct 245378 CCGTTCGAAAGCCCCGAAGCCCAGCTGCTCAACATCCAGATCTTCGAGACCATCTACCAC 245437
Query 76325 GCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAG 76384
|| |||||||||| || || ||| | || | || | || |||| ||||||| |||
Sbjct 245438 GCCGCCCTGGAGGCCAGCTGCGAACTCGCCGCAGAGCTCGGCCCCTACGAGACATACGAG 245497
Query 76385 GGTTCTCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC 76442
|| ||| | |||| ||||| | || |||| || ||||||| || || || | |
Sbjct 245498 GG--CTCGCCCGTCAGTAAGGGCATCCTCCAGTACGACATGTGGG-AGAAGACGCCGACC 245554
Query 76443 -TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501
| | |||||| | | || ||||| ||| | | || | | |||||
Sbjct 245555 GACCTGTGGGACTGGAAGCTGCTGAAGGAGAAGATCGCCAAACACGGCGTGAGGAACAGC 245614
Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561
|| || |||| || ||||| || || |||||||| || ||| |||| || || || | |
Sbjct 245615 CTGCTGCTGGCGCCCATGCCCACGGCGTCCACCGCCCAGATCCTGGGCAACAACGAGTCC 245674
Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621
| || | ||||| | ||||||||| | || || | || ||||| ||
Sbjct 245675 ATCGAGGCGTACACCAGCAACATCTACACCCGCAGGGTGCTGTCCGGAGAGTTCCAGATC 245734
Query 76622 GTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681
|||||| |||||| |||| ||||| | | || || || ||| | |||| ||||||
Sbjct 245735 GTCAACCCTCACCTCCTCAAGGACCTGACGGAGCGCGGCCTGTGGAACGAGGAGATGAAG 245794
>seq4
Length=1291530
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136
||||| ||| | || || || |||||||| || |||||||| || |||||| |||
Sbjct 279568 GAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATTTTCTTCTCAGGCTCATTCGCTGCT 279509
Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196
|| || ||| |||||||| | || |||||||||||||| || ||| || ||||| |||
Sbjct 279508 ATCTACTGGCTGAAGAAGAGAGGCCTCATGCCAGGCCTTACCTACTCCAACGAACTCATT 279449
Query 65197 TCCCGAGATGAGG 65209
| | || ||||
Sbjct 279448 AGCAGGGACGAGG 279436
>seq577
Length=410616
Score = 86.0 bits (94), Expect = 7e-12
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 76189 AAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATT 76248
|||||| || | ||| ||||| |||||||| | ||||| || ||||| || |||| ||
Sbjct 150954 AAAGTCCAACAAGCGTCACAGGCCTATTGGAATCGGTGTGCAGGGTCTGGCTGATGCCTT 150895
Query 76249 TATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTT 76308
||| | |||||| ||||||| || ||| || | || || |||||
Sbjct 150894 TATCCTCATGCGCTACCCATTTGAAAGCCCAGAGGCCCAGTTACTCAACATTCACATCTT 150835
Query 76309 TGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
||||||||| ||| |||| |||||||||| |||||||| ||||
Sbjct 150834 TGAAACCATCTATTACGCCGCCCTGGAGGCCAGTTGTGAGCTGGC 150790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596435461325440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |