Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq161 87.8 5e-12 >seq161 Length=490181 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || ||||| || || || ||||| | | || ||||| || |||||||| | ||| Sbjct 348293 GTCTTGACAGCCGTGTCGATCAGACCCTCTCTGCCTCCCATGGCGTGGAAGAAGAACTCG 348352 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 ||| ||| ||||| | | ||||| |||| ||||| || || |||||| | Sbjct 348353 GTCGG-CGTCAGCCCGGCCAGGTAGGAGTTCTCCACGAAGCCTCGGCTCTCGGGGCCGTA 348411 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | ||||| ||||| || | || || | ||| | ||||| ||||| || Sbjct 348412 GTCGTCCTTGATGAAGTGAGGCAGCGTGCGGTGCTTGAACCCGAAGGGGATTCGCTTACC 348471 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 348472 CTCCACGTTCTGCTGGCCCA 348491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471478388357956