Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq86 354 8e-93 seq2100 134 1e-26 seq722 122 8e-23 seq577 91.5 1e-13 >seq86 Length=659436 Score = 354 bits (392), Expect = 8e-93 Identities = 1017/1539 (66%), Gaps = 50/1539 (3%) Strand=Plus/Minus Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290 |||| ||||||| | || || | | || || | ||| ||||| |||| ||||| | Sbjct 245768 GCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCC 245709 Query 148291 GCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCG 148350 || || | |||||| || ||| || | |||||||||||||||| ||||| | Sbjct 245708 TGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGG 245649 Query 148351 CGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTA 148410 |||| | |||||||||||| ||| | |||||| ||| | || ||| | || | Sbjct 245648 CGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGA 245589 Query 148411 TTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGT 148470 | || |||||| | ||||||||| || | ||| ||| | ||||||||||| Sbjct 245588 TCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTCTTCTCCCACATGTCGT 245529 Query 148471 ACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCG 148530 |||| || ||||| || |||| ||||||||| | ||| || ||| || | | Sbjct 245528 ACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTG 245469 Query 148531 CCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 | || ||||||||||| ||||| || ||| ||| ||| || |||||| || || ||| Sbjct 245468 CGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGT 245409 Query 148591 TGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAA 148650 |||||||| || ||||||| |||| |||| | | | || || ||||| | Sbjct 245408 TGAGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCA 245349 Query 148651 GGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC-- 148708 | ||||| ||||| | || || |||| ||| ||||||| | | || ||| || Sbjct 245348 GACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGA-CGTCTCG-GCT-TCGG 245292 Query 148709 -GAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAA 148767 || ||| |||| |||| |||||||||||||| || || ||| | ||||| || | Sbjct 245291 GGACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGA 245232 Query 148768 TTCTGCGCAGCAATTCAAAATCGTACTTGTCATCT------ACGATGCATCGGTTCACGG 148821 | |||| | || ||| | | ||| ||| | ||| ||| | || Sbjct 245231 CGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGGCGTGACG-TACAT--GTTGAGGG 245175 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 |||| ||||| || ||||| |||||| ||| ||| | | ||||||| || | ||| | Sbjct 245174 CGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTG 245115 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACG 148941 ||| || |||||||||||||| ||||| ||||| || |||||||| |||||||| | Sbjct 245114 TGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAG 245055 Query 148942 CGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGAT 149001 |||||||||| |||||||| || || ||||| ||| | || | ||| || Sbjct 245054 CGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATG--GCGTA 244997 Query 149002 GC--AGGTCCTGCGCGCGCACTTGCTGCTCGT-AGCGACCC-TCCTGCTCGTATAAAGTA 149057 | || | |||||| ||| | ||| | | | ||| |||| ||| ||| || Sbjct 244996 CCAGAGCTGCTGCGCCTTCACCACC--CTCTTCACCCTCCCTTCCTTCTCATATCTGGTG 244939 Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 || ||| ||||||| |||| || |||| ||||| || ||||| |||| | || ||| Sbjct 244938 TAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACAC 244879 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 || | ||||| | || | ||| | |||||| ||||| || || | ||| | Sbjct 244878 ATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAG 244819 Query 149178 GCGTACATGAGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA 149235 ||||| | ||||| | || | ||| || || || |||| ||| | | Sbjct 244818 GCGTAGAAAAGGTCTCTGGCTCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCA 244761 Query 149236 GCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC------CT 149289 | | | ||| | ||| ||||||||| || | ||||| |||| || || || Sbjct 244760 GGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCT 244701 Query 149290 TGCGCTTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTT 149349 || ||||||||||||||||||| ||| || ||||||| | |||| | ||| || Sbjct 244700 TG---TTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGA 244644 Query 149350 CAATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTG 149408 | | || ||| ||||||| || ||| ||| || || || ||| | | Sbjct 244643 CCAATCCGTTGGAGTTGCCGTTGGTGCCAGC-GATGTAGCTTCCCGTCGATCGGATGCAG 244585 Query 149409 TGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTC 149468 ||| |||||||| ||||| || |||| || ||| |||||| | || || Sbjct 244584 CTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTG 244525 Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528 ||||||||| |||||||||||| ||||||||| ||||| ||||| | ||| ||| Sbjct 244524 TCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGC 244465 Query 149529 GGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTC 149588 || || ||||| ||| | ||| || |||||| || || | |||| | Sbjct 244464 GGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGAC 244405 Query 149589 ATCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCG-CCATGGATGCCTATGGCG 149645 | | | ||| | ||||| ||| || ||| ||||| ||| || ||||| || | | Sbjct 244404 AGGAGGTTGTAGGTCTCGATGGCA-GC-GTCGATGTC-TCGCCCGTGGATCCCAACCGAC 244348 Query 149646 ACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTT---GTTTCCAATTTTGAGCAAG 149702 || | ||| ||||| |||||||| ||||| |||||||| ||| || || |||| | Sbjct 244347 ACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTT---GATCTTCAGCAGG 244291 Query 149703 TAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAG 149741 ||| | || || |||||| | || ||| | |||||| Sbjct 244290 TAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAG 244252 >seq2100 Length=111253 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| || ||| | | | || || |||||||| || Sbjct 27608 GTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCTGCTTTCC 27666 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| ||||| || |||||| ||| Sbjct 27667 GGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTT 27726 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| ||||| |||||||||| || | ||||| |||||||||||| || || Sbjct 27727 AACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTGCCGGTGAGGGT 27786 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| || || |||||||| Sbjct 27787 TTTCACAAAGATCTGCAT 27804 Score = 132 bits (146), Expect = 5e-26 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| ||||| || |||||||| || || ||| | | | || || |||||||| | Sbjct 23645 GGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCA-TCTTCCAGCTGCTTTC 23703 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || |||||||| ||||| || ||| || || Sbjct 23704 CAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCT 23763 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| |||||| |||||||||| || | ||||| |||||||||||| || | Sbjct 23764 TGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGG 23823 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 23824 TCTTGACAAAGATCTGCATG 23843 Score = 129 bits (142), Expect = 6e-25 Identities = 150/200 (75%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || |||||||| || ||||| || | ||| | | | ||||| |||||||||| Sbjct 23189 GGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCA-TCCTCCAGCTGCTTGC 23247 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || |||||||| ||||| || ||| || || Sbjct 23248 CAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCT 23307 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| |||||| |||| ||||| || | ||||| ||||||||| || || | Sbjct 23308 TGACGTTCTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAGTGAGGG 23367 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 23368 TCTTGACGAAGATCTGCATG 23387 Score = 120 bits (132), Expect = 3e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || || | || |||| ||||||||| || |||||||| ||||| Sbjct 27422 TCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTA 27481 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| ||||| ||||||| || || | ||||| | Sbjct 27482 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 27541 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||||||||| || || || ||||| ||||||||| Sbjct 27542 GTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 27577 >seq722 Length=280156 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| |||||||| || || ||| | | | || || ||||| || | Sbjct 192151 GGTGGACTCCTTCTGGATATTGTAGTCCGACAGGGTGCGGCCA-TCTTCCAGCTGTTTAC 192093 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| ||||| |||||||| || || |||||| || Sbjct 192092 CAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCT 192033 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || |||||||||| || | ||||| ||| || || || || | Sbjct 192032 TCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGG 191973 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||||||||| Sbjct 191972 TTTTCACGAAAATCTGCAT 191954 Score = 107 bits (118), Expect = 2e-18 Identities = 147/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || || || || || ||| | | | || || ||||| || | Sbjct 192379 GGTGGACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCA-TCTTCCAGCTGTTTAC 192321 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| ||||| ||| |||| || || |||||| || Sbjct 192320 CAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCCTGAATCTTTGCCT 192261 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || |||||||||| || | ||||| || || || || || | Sbjct 192260 TCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGTCTTCCCAGTGAGGG 192201 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 |||| ||||||||||||||| || Sbjct 192200 TTTTCACGAAAATCTGCATGCCT 192178 >seq577 Length=410616 Score = 91.5 bits (100), Expect = 1e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 |||| || |||||||| | ||| ||||||||| | ||||| ||||| || | || | Sbjct 151943 TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGT 152002 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 || |||| |||||||| ||||||||||| ||||||||||| Sbjct 152003 TGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 152042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483312102833120