Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 102 5e-17
seq119 89.7 3e-13
>seq2100
Length=111253
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| || | ||| | |||| || || ||| ||||| || |||||||| |||||
Sbjct 27578 CCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGAC 27637
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || ||||||||||| |||| | |||||| || | ||
Sbjct 27638 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 27697
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || || || || || | | ||||| || | |||||| || | |||||
Sbjct 27698 ATGCCCTCCTTATCCTGGATCTT-GGCCTTAACATTCTCAATGGTGTCACTGGGCTCCAC 27756
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| ||||| || || | ||||| ||||||||||||||
Sbjct 27757 CTCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 27804
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| ||| | || | || || ||| |||||||| || ||||| || ||
Sbjct 23616 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGAC 23675
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || ||||| ||||| |||| | |||||| || | ||
Sbjct 23676 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 23735
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| || || || || ||||| || | | | ||| ||||||||| | |||||
Sbjct 23736 ATGCCCTCCTTATCCTGGATTTTGGCCTTGA-CGTTCTCAATGGTGTCGCTGGGCTCCAC 23794
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| ||||| || || | || || ||||||||||||||
Sbjct 23795 CTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 23842
>seq119
Length=537137
Score = 89.7 bits (98), Expect = 3e-13
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619
|||| || |||||||| || || ||||||||| |||| |||| |||||||| ||||| |
Sbjct 399875 CTTTCTGGATGTTGTAGTCTGACAGTGTGCGTCCGTCTTCCAGCTGTTTTCCAGCAAAGA 399934
Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCT 33648
||| ||||||||||||| | || | ||||
Sbjct 399935 TCAGACGCTGCTGATCTGGGGGAATACCT 399963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328631938632960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |