Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq86 268 9e-67 seq722 116 4e-21 >seq86 Length=659436 Score = 268 bits (296), Expect = 9e-67 Identities = 999/1538 (65%), Gaps = 50/1538 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | || ||||| || | |||||| | | | || | ||||| ||| | | | Sbjct 245739 TTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCC 245680 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || ||||| |||| || || |||||| ||||| | Sbjct 245679 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGC 245620 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || |||| ||| || ||||||| || || ||||||||| Sbjct 245619 AGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 245561 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 || ||| | |||||| | |||||||||||||||||| | || |||| |||| Sbjct 245560 CAGGTCG--GTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGC 245503 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAG 147188 ||| || | || |||| ||| || ||||| | | ||| ||||| ||||| || Sbjct 245502 GAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCAGCTGGCCTCCAG 245444 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || | | ||| ||||| ||| ||| || |||| || | ||||| ||| || Sbjct 245443 GGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTC 245384 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | | || |||| || | ||||||||||||| |||||||| |||| ||||| || Sbjct 245383 GAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGG 245324 Query 147309 TCGATGCTTTTCGTTG-----CTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363 | || | |||| || |||||| | | || |||| |||| || Sbjct 245323 CCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACC-----GGGTAGTAGTTGATGTCG 245269 Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 || |||||||||||||| ||| | || || || | | || |||| ||| || Sbjct 245268 ATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCG 245209 Query 147424 TAAGTCCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 |||||| ||| || |||||| || ||| | |||||| || ||||| |||||||| Sbjct 245208 AAAGTCCGCTCTGGCGTGACGTAC--AT--GTTGAGGGCGATGGAGGCCAGGTTGCAGAC 245153 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 |||| ||| || | | |||||| ||| | || | ||| |||||||||||||| || Sbjct 245152 GGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGAT 245093 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 | |||| || ||||| ||||| |||| ||||| ||||| ||| |||||||||| || Sbjct 245092 GGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGG 245033 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGC--TC-GCA 147658 ||||| ||| || | || | ||| | || || | |||||| || || Sbjct 245032 CGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCGCCTTCACCA 244974 Query 147659 CCCGCTGCCGATAGCGGCCC-TCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717 ||| || | | | ||| || || || || | ||| | | ||| ||||| || Sbjct 244973 CCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCT 244918 Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATGTCGTC 147776 || |||| ||| | || |||||||||| | || |||||||||| ||||| | || Sbjct 244917 CCCCAGCACTCGTCCAGCCCGGGACACTCGCTG-GGACACATCAAGGACCAGTCCTGGTT 244859 Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC--GC 147834 | || | ||| ||||| ||||| | ||||| ||||| | ||| || | || Sbjct 244858 GCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGC 244799 Query 147835 GCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCG 147894 || ||| ||||| || |||| |||| | || | | | | |||| | Sbjct 244798 TCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAG 244741 Query 147895 TGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACA 147951 ||||| ||||| | ||| | ||| | || || | | || |||||||||||||| Sbjct 244740 TGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACG 244681 Query 147952 TGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTG 148011 | ||| || ||||||| | || | || ||| || ||| ||| | | |||||||| Sbjct 244680 TAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTG 244621 Query 148012 GTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCG 148071 ||| | ||| | ||| || | ||| | | ||| ||||| || ||||| Sbjct 244620 GTGCCAGCGATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCA 244561 Query 148072 CCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCG 148131 || |||| || ||| ||||| | || || ||||||||| |||||||||||| Sbjct 244560 GCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCG 244501 Query 148132 TTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG--CGTTCCCGCCG-AG 148188 | || | | |||| || || ||| ||||| ||| | ||||| || | Sbjct 244500 TCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGG---CCGGTTGGTCCCGGCGTTG 244444 Query 148189 AAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATA 148248 || ||||| ||| ||||| || ||| | || | || | | || ||||| || Sbjct 244443 AAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATG 244384 Query 148249 GCGTCTTCGATGTCGTCG-CCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGG 148307 || | |||||||| ||| ||||| || || | || || | ||||||||||||||| || Sbjct 244383 GCAGCGTCGATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 244325 Query 148308 TCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367 || ||||| |||| ||||||||| || || || || || || ||| |||| Sbjct 244324 CCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACC 244265 Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGG 148405 ||| | ||||| |||||| || ||| ||||| Sbjct 244264 GAAGAAGTTGTAGGAGAAATCTCTGTCATAAATGATGG 244227 >seq722 Length=280156 Score = 116 bits (128), Expect = 4e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || || |||||||| || ||| || |||||| ||||||||||| | | Sbjct 192147 GACTCCTTCTGGATATTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 192088 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 ||||||| | ||| || || ||||| |||||||||||||| ||| ||| |||| Sbjct 192087 AAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTCACG 192028 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||||| || | || | || || ||||| || ||||| Sbjct 192027 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTC 191968 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 191967 ACGAAAATCTGCAT 191954 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||| ||||| || ||| || |||||| ||||||||||| | | Sbjct 192375 GACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 192316 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 ||||||| | ||| || || ||||| ||| |||||||||| ||| ||| |||| Sbjct 192315 AAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCCTGAATCTTTGCCTTCACG 192256 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||||| || | || | || || ||||| || ||||| Sbjct 192255 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGTCTTCCCAGTGAGGGTTTTC 192196 Query 132110 ATGAAAATCTGCATGACT 132127 | ||||||||||||| || Sbjct 192195 ACGAAAATCTGCATGCCT 192178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476504033971680