Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq86 268 9e-67
seq722 116 4e-21
>seq86
Length=659436
Score = 268 bits (296), Expect = 9e-67
Identities = 999/1538 (65%), Gaps = 50/1538 (3%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| | || ||||| || | |||||| | | | || | ||||| ||| | | |
Sbjct 245739 TTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCC 245680
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| | ||||| || ||||| | || ||||| |||| || || |||||| ||||| |
Sbjct 245679 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGC 245620
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071
| || || | || |||| ||| || ||||||| || || |||||||||
Sbjct 245619 AGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 245561
Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129
|| ||| | |||||| | |||||||||||||||||| | || |||| ||||
Sbjct 245560 CAGGTCG--GTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGC 245503
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAG 147188
||| || | || |||| ||| || ||||| | | ||| ||||| ||||| ||
Sbjct 245502 GAGCCCTCGTATGTCTCGTAGGGGCCGA-GCTCTGCGGCGAGTTCGCAGCTGGCCTCCAG 245444
Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248
|| | | ||| ||||| ||| ||| || |||| || | ||||| ||| ||
Sbjct 245443 GGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTC 245384
Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308
| | || |||| || | ||||||||||||| |||||||| |||| ||||| ||
Sbjct 245383 GAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGG 245324
Query 147309 TCGATGCTTTTCGTTG-----CTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363
| || | |||| || |||||| | | || |||| |||| ||
Sbjct 245323 CCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACC-----GGGTAGTAGTTGATGTCG 245269
Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423
|| |||||||||||||| ||| | || || || | | || |||| ||| ||
Sbjct 245268 ATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCG 245209
Query 147424 TAAGTCCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482
|||||| ||| || |||||| || ||| | |||||| || ||||| ||||||||
Sbjct 245208 AAAGTCCGCTCTGGCGTGACGTAC--AT--GTTGAGGGCGATGGAGGCCAGGTTGCAGAC 245153
Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542
|||| ||| || | | |||||| ||| | || | ||| |||||||||||||| ||
Sbjct 245152 GGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGAT 245093
Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602
| |||| || ||||| ||||| |||| ||||| ||||| ||| |||||||||| ||
Sbjct 245092 GGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGG 245033
Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGC--TC-GCA 147658
||||| ||| || | || | ||| | || || | |||||| || ||
Sbjct 245032 CGTCCCGGTTTCGGTCTGGGACTCGATGAT-GGCGTACCAGAGCTGCTGCGCCTTCACCA 244974
Query 147659 CCCGCTGCCGATAGCGGCCC-TCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCG 147717
||| || | | | ||| || || || || | ||| | | ||| ||||| ||
Sbjct 244973 CCCTCTTC----ACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCT 244918
Query 147718 CCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATGTCGTC 147776
|| |||| ||| | || |||||||||| | || |||||||||| ||||| | ||
Sbjct 244917 CCCCAGCACTCGTCCAGCCCGGGACACTCGCTG-GGACACATCAAGGACCAGTCCTGGTT 244859
Query 147777 CGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC--GC 147834
| || | ||| ||||| ||||| | ||||| ||||| | ||| || | ||
Sbjct 244858 GCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGC 244799
Query 147835 GCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCG 147894
|| ||| ||||| || |||| |||| | || | | | | |||| |
Sbjct 244798 TCTCTGC--TCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAG 244741
Query 147895 TGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCGACA 147951
||||| ||||| | ||| | ||| | || || | | || ||||||||||||||
Sbjct 244740 TGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACG 244681
Query 147952 TGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTG 148011
| ||| || ||||||| | || | || ||| || ||| ||| | | ||||||||
Sbjct 244680 TAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTG 244621
Query 148012 GTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCG 148071
||| | ||| | ||| || | ||| | | ||| ||||| || |||||
Sbjct 244620 GTGCCAGCGATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCA 244561
Query 148072 CCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCG 148131
|| |||| || ||| ||||| | || || ||||||||| ||||||||||||
Sbjct 244560 GCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCG 244501
Query 148132 TTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG--CGTTCCCGCCG-AG 148188
| || | | |||| || || ||| ||||| ||| | ||||| || |
Sbjct 244500 TCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGG---CCGGTTGGTCCCGGCGTTG 244444
Query 148189 AAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATA 148248
|| ||||| ||| ||||| || ||| | || | || | | || ||||| ||
Sbjct 244443 AAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATG 244384
Query 148249 GCGTCTTCGATGTCGTCG-CCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGG 148307
|| | |||||||| ||| ||||| || || | || || | ||||||||||||||| ||
Sbjct 244383 GCAGCGTCGATGTC-TCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 244325
Query 148308 TCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367
|| ||||| |||| ||||||||| || || || || || || ||| ||||
Sbjct 244324 CCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACC 244265
Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGG 148405
||| | ||||| |||||| || ||| |||||
Sbjct 244264 GAAGAAGTTGTAGGAGAAATCTCTGTCATAAATGATGG 244227
>seq722
Length=280156
Score = 116 bits (128), Expect = 4e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || || |||||||| || ||| || |||||| ||||||||||| | |
Sbjct 192147 GACTCCTTCTGGATATTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 192088
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
||||||| | ||| || || ||||| |||||||||||||| ||| ||| ||||
Sbjct 192087 AAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCCTTCACG 192028
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | |||||||| || | || | || || ||||| || |||||
Sbjct 192027 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTC 191968
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 191967 ACGAAAATCTGCAT 191954
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || ||||| ||||| || ||| || |||||| ||||||||||| | |
Sbjct 192375 GACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCA 192316
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
||||||| | ||| || || ||||| ||| |||||||||| ||| ||| ||||
Sbjct 192315 AAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCCTGAATCTTTGCCTTCACG 192256
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | |||||||| || | || | || || ||||| || |||||
Sbjct 192255 TTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGTCTTCCCAGTGAGGGTTTTC 192196
Query 132110 ATGAAAATCTGCATGACT 132127
| ||||||||||||| ||
Sbjct 192195 ACGAAAATCTGCATGCCT 192178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476504033971680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |