Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq86 125 7e-24
seq2100 104 2e-17
seq722 104 2e-17
>seq86
Length=659436
Score = 125 bits (138), Expect = 7e-24
Identities = 459/712 (64%), Gaps = 15/712 (2%)
Strand=Plus/Plus
Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291
|||||| ||||| | || | ||||||||| | ||| |||||||| ||||| ||||||||
Sbjct 244999 CGCCATCATCGAGTCCCAGACCGAAACCGGGACGCCCTACATGCTCTACAAGGACGCTTG 245058
Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351
|||| || ||||| || ||| |||||||||| |||||||| || ||| | ||
Sbjct 245059 CAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTCTGCACAGA 245118
Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411
| || |||||| | ||||| |||||||| ||||| || || || | |
Sbjct 245119 GGTGGTGGAGTACACCAGCAAGGACGAGGTGGCCGTCTGCAACCTGGCCTCCATCGCCCT 245178
Query 8412 AAACGCGTTCGTTGATCGACGCTCAAAC--ACTTACGACTTTGAACAATTGAAAAACGCC 8469
||| || ||| |||| | | |||| |||||| | | || | ||
Sbjct 245179 CAACATGTACGTC-----ACGCCAGAGCGGACTTTCGACTTCAAGAAGCTGGC---CTCC 245230
Query 8470 GTG--CAAG-TGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTG 8526
|| |||| | | || || | | ||||| || |||| | || || |
Sbjct 245231 GTCACCAAGGTAATCGTGAAAAACCTCAACAAGATCATCGACATCAACTACTACCCGGTC 245290
Query 8527 GAAGAAGCGCGCGTA-TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCT 8585
||||| || | || |||| ||||||||| || | || | ||||| || |||||
Sbjct 245291 CCCGAAGC-CGAGACGTCCAACAAGCGCCACAGGCCGATCGGGATCGGCGTCCAGGGTCT 245349
Query 8586 GGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAA 8645
|||||| || || | || |||| | || | |||||||| ||||| | |||||||
Sbjct 245350 GGCCGATGCCTTCATCCTGATGCGACATCCGTTCGAAAGCCCCGAAGCCCAGCTGCTCAA 245409
Query 8646 CATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCG 8705
||| | || || || | || ||| ||| | || |||||||| |||| |||
Sbjct 245410 CATCCAGATCTTCGAGACCATCTACCACGCCGCCCTGGAGGCCAGCTGCGAACTCGCCGC 245469
Query 8706 AGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATA 8765
||| | ||| | ||||| | |||| |||| || | ||| || || | || ||
Sbjct 245470 AGAGCTCGGCCCCTACGAGACATACGAGGGCTCGCCCGTCAGTAAGGGCATCCTCCAGTA 245529
Query 8766 CGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAAT 8825
|||||||||| | ||||| ||| ||||| | |||| |||| || ||
Sbjct 245530 CGACATGTGGGAGAAGACGCCGACCGACCTGTGGGACTGGAAGCTGCTGAAGGAGAAGAT 245589
Query 8826 TGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGC 8885
|| || ||| || | || ||| || |||| ||||||||| || | || ||
Sbjct 245590 CGCCAAACACGGCGTGAGGAACAGCCTGCTGCTGGCGCCCATGCCCACGGCGTCCACCGC 245649
Query 8886 TCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
|| || |||| |||||||| ||| | ||| ||| ||||| |||| | |||
Sbjct 245650 CCAGATCCTGGGCAACAACGAGTCCATCGAGGCGTACACCAGCAACATCTAC 245701
Score = 123 bits (136), Expect = 3e-23
Identities = 300/454 (66%), Gaps = 3/454 (1%)
Strand=Plus/Plus
Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583
|||| || |||| |||||||| || || || || || |||||||| || | ||
Sbjct 244288 CTACCTGCTGAAGATCAACGGGAAAGTGGCCGAGCGGCCGCAGCACATGCTCATGAGGGT 244347
Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643
| |||| || || ||||| |||||| ||||| ||| | || || ||| | | ||||
Sbjct 244348 GTCGGTTGGGATCCACGGGCGAGACATCGACGCTGCCATCGAGACCTACAACCTCCTGTC 244407
Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703
||| ||| || ||||| || || ||| | || ||| || || ||| ||| ||
Sbjct 244408 GGAGAAGTGGTTCACCCACGCCTCTCCGACCCTCTTCAACGCCGGGACCAACCGGCCGCA 244467
Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763
||||| || || |||| |||||| || ||||||||||| ||||| ||| ||||
Sbjct 244468 GCTGTCCAGCTGCTTCCTGCTCACCATGAAGGACGACAGCATCGAAGGCATCTACGACAC 244527
Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823
||| | ||||| |||||||| | || ||||| || || || || | |
Sbjct 244528 CCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCTGGCGGGATCGGCGTGGCGGTGAGCTG 244587
Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883
| | || | | || ||| ||||| ||||||||| || ||| ||| || | ||
Sbjct 244588 CATCCGATCGACGGGAAGCTACATCGCTGGCACCAACGGCAACTCCAACGGATTGGTCCC 244647
Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAA 7940
||| || | || | ||| ||| ||| || | || |||||||| || ||| |
Sbjct 244648 GATGCTGAGAGTTTACAACAACACGGCTCGCTACGTCGACCAGGGCGGCAACAAGAGACC 244707
Query 7941 AGGCGCCGCTGCCATCTATTTGGAGCCGTGGCAC 7974
|| ||| ||||| || |||| |||||||||
Sbjct 244708 CGGGGCCTTCGCCATGTACCTGGAACCGTGGCAC 244741
>seq2100
Length=111253
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || || | || ||||| || || ||||| || || ||||||||||| |
Sbjct 23160 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAA 23219
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| || || ||
Sbjct 23220 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 23279
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || ||||| ||||| || | |||||| | ||||||
Sbjct 23280 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCACC 23339
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || |||||||| || || | || || ||||| || |||||
Sbjct 23340 TCCAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 23386
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | || ||||| || |||||||| || || ||||||||||||
Sbjct 27578 CCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGAC 27637
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| || || ||||| |||| | |||||| || || ||
Sbjct 27638 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 27697
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || || | ||||| | |||||
Sbjct 27698 ATGCCCTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACC 27757
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || |||||||| ||||| | ||||| || || || ||||| |||
Sbjct 27758 TCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTTG 27808
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | || ||||| || ||||| ||||| || |||||||||||
Sbjct 23388 CCACCCCTGAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 23447
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| || || ||||| |||| | ||||||||| || ||
Sbjct 23448 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCAGGGGGG 23507
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| || | |||||| | || ||
Sbjct 23508 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACC 23567
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || ||||| | || || ||||| || |||||
Sbjct 23568 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 23614
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || || | || ||||| || || ||||| ||||| ||||||||||| |
Sbjct 27350 CCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAA 27409
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| || || ||||| |||| | |||||| || || ||
Sbjct 27410 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 27469
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| || | ||||| | || ||
Sbjct 27470 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 27529
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || |||||||| ||||| | || || ||||| || |||||
Sbjct 27530 TCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 27576
>seq722
Length=280156
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| || || || | ||| ||||| || ||||| ||||| || || ||||||||
Sbjct 192180 CCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAC 192121
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || |||||||| || ||||| || | | |||||| || || ||
Sbjct 192120 AGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGA 192061
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||||||||| || ||||| ||| || || || | || || | |||||
Sbjct 192060 ATGCCTTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACC 192001
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || ||||| || || || | ||||| |||||||| ||||| ||
Sbjct 192000 TCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 191951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505284761169760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |