Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq86 145 1e-29
seq577 96.9 4e-15
seq990 89.7 6e-13
>seq86
Length=659436
Score = 145 bits (160), Expect = 1e-29
Identities = 949/1500 (63%), Gaps = 60/1500 (4%)
Strand=Plus/Minus
Query 110614 CTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGAC 110673
|||||| |||| | ||| || || || | | ||||| |||| |||||| ||||||
Sbjct 245794 CTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGAC 245735
Query 110674 AATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAA 110733
|| ||||| || | || || | ||||||||| | ||||| | || |
Sbjct 245734 GATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGAT 245675
Query 110734 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 110793
| | || || || |||| ||| || |||||||| || || ||||| || |||| || ||
Sbjct 245674 GGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAG 245615
Query 110794 ACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA- 110852
||||| | | || | | ||| ||||| || | | |||||| | |
Sbjct 245614 GCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 245555
Query 110853 GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAACC 110910
| | || || || |||||||||| |||| || | ||||| |||| | ||| ||
Sbjct 245554 GGTCGGCGTCTTCT-CCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAG--CC 245498
Query 110911 CTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGC 110970
||| | || || |||| || | || | || | ||| ||||| |||||||||| ||
Sbjct 245497 CTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGC 245438
Query 110971 GTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGC 111030
||| || ||||| || ||||| | || | | || |||||| || || |
Sbjct 245437 GTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGG 245378
Query 111031 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 111090
| || || || || |||| || ||||| || || || | || || || |||||
Sbjct 245377 ATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTG 245318
Query 111091 TCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGT 111149
||| | || ||| | | || || || || || | || |||| |||| ||
Sbjct 245317 GCGCTTGTTGGACGT-CTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCTTGT 245259
Query 111150 TTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG 111209
| || ||||| | | ||| |||| || || | | || ||||| ||
Sbjct 245258 TGAGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCG-- 245201
Query 111210 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
|||| |||| ||| | |||||||| || |||| ||||| || ||| ||| |
Sbjct 245200 -CTCTGGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGT 245142
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
|||| |||||||| | | ||||| || | |||| | || || || |||| |
Sbjct 245141 CCTTGCTGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGT 245082
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
||| ||||| |||||| ||||||| || |||||||||||||||||||||||||| || |
Sbjct 245081 TCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTT 245022
Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCC 111448
| ||||| || | || || || | ||| | | | ||| || || | || ||
Sbjct 245021 CGGTCTGGGACTCGATGATGGCGTACCAGAGCTGCTGCGCCT-TCACCACCCTCTTCACC 244963
Query 111449 CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGA 111507
| || ||| ||| || | |||||||| || |||||||| ||| | || |||
Sbjct 244962 CTCCCTTCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCC-CAGCACTCGTC 244904
Query 111508 GAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAACCCGC 111565
|| || || || | ||||| | | ||||| | || || ||| || | |
Sbjct 244903 CAGCCCGGGACACTCGCTGGGACACATCAAGGACCA--GTCCTGGTTGCTCTCCACTCTC 244846
Query 111566 TTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCG 111625
|||||||| ||||| || ||||||| || | || || ||||| | ||| ||
Sbjct 244845 TTCATGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCC 244786
Query 111626 TCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 111684
| ||| ||| || | | ||| ||||| || | | || |||||| || || ||
Sbjct 244785 TTTCCTGTGTT-CTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAG 244727
Query 111685 ATAGACTGCGA------TAGATCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737
|| | |||| | || ||| | | ||||| || | || ||||| || |
Sbjct 244726 GTACATGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCC----TGGTCGACGTAGCGAGCCG 244671
Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797
|| ||| | || | ||||| || | | || | || | || || || ||
Sbjct 244670 TGTTGTTGTAAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCC----- 244616
Query 111798 TACGAGATTTATTGGCTCTCACATC-AT-GGATG---------TGCATCCCAATACCCCC 111846
| ||| || ||| || | || || ||||| || || || || ||
Sbjct 244615 --AGCGATGTA---GCT-TCCCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCC 244562
Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906
||| |||| || || |||| |||| | | || || | ||||| || | ||| |||
Sbjct 244561 AGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTC 244502
Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC--TTGGTGTACCAGCATTG 111964
||||| ||| || |||||||| ||||||| |||||| | ||| || || || |||
Sbjct 244501 GTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTG--GTCCCGGCGTTG 244444
Query 111965 AAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAA 112023
|||||||| || | ||||| ||||| || | | |||| || ||| ||||| |
Sbjct 244443 AAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGGAGGTTGTAGGTCTCGAT 244385
Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
| ||| || |||||| ||||||||| || | | |||| ||||| ||||| ||| ||
Sbjct 244384 GGCAGCGTCGATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGCATGTGCTGCGG 244325
>seq577
Length=410616
Score = 96.9 bits (106), Expect = 4e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| ||| |||||| || | || ||||| || | ||| ||| || || ||
Sbjct 151929 CTCATCTTTACTTGTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCC 151988
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
|| ||| | ||||| ||||| ||||||| || ||||||||||||||||| ||||| ||
Sbjct 151989 CAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACC 152048
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|||||| ||||| || | || || || | |||
Sbjct 152049 CGTCTCTGTCTGCGACTCGATGATGGCGTACCA 152081
Score = 84.2 bits (92), Expect = 3e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962
||||| || | |||||||||| | || || | |||| ||||| || ||||||
Sbjct 150751 GGAGAGCCGGCGTAGGTTTCATACGGGCCAAATTCTGCTGCCAGCTCACAACTGGCCTCC 150810
Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022
|||| |||| ||| |||||||||||||| || || | || ||| ||
Sbjct 150811 AGGGCGGCGTAATAGATGGTTTCAAAGATGTGAATGTTGAGTAACTGGGCCTCTGGGCTT 150870
Query 111023 TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
||||||| |||||| | ||||| |||| || ||||| || ||||| | ||||||
Sbjct 150871 TCAAATGGGTAGCGCATGAGGATAAAGGCATCAGCCAGACCCTGCACACCGATTCCAATA 150930
Query 111083 GGTCTGTGTCGCATATTAGACTTT 111106
|| ||||| ||| | || ||||||
Sbjct 150931 GGCCTGTGACGCTTGTTGGACTTT 150954
>seq990
Length=431866
Score = 89.7 bits (98), Expect = 6e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| ||||||||||||||||||||||||||||||||||| || || |||||| |||||
Sbjct 239315 TACTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGAGAAATGTTCTCCATG 239256
Query 122431 AAGTCAAATGGATTCTTCG 122449
||||| || || |||| ||
Sbjct 239255 AAGTCGAACGGGTTCTCCG 239237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627890787004800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |