Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq86 165 1e-35
seq4 96.9 4e-15
seq577 89.7 6e-13
>seq86
Length=659436
Score = 165 bits (182), Expect = 1e-35
Identities = 886/1390 (64%), Gaps = 42/1390 (3%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||| |||||
Sbjct 245700 TAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAC 245641
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| ||||||||||| |||| || |||||||| | | || | || || |||
Sbjct 245640 GCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCC 245581
Query 118302 TTGAG-AGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357
|| || ||| ||| |||| | || | | |||| | || ||||| || ||||
Sbjct 245580 TTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTCTCC---CACATGTCGTACTG 245525
Query 118358 GAGGATACCTTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415
|||||| || | |||| ||||| ||||| ||||||| || ||||| | |
Sbjct 245524 GAGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCG 245467
Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475
|| | |||| |||| ||||| ||||| ||||| || || || || || || | ||
Sbjct 245466 GCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTG 245407
Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535
| || ||| ||| | || |||| |||| || || || |||| || |||
Sbjct 245406 AGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGA 245347
Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC--- 118592
|| ||||| |||| || || || | || | | | || ||| || ||| ||
Sbjct 245346 CCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCT---CGGCTTCGGGG 245290
Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652
|| || || | || | ||||| | | | || || ||||| || ||||| ||||
Sbjct 245289 ACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACG 245230
Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712
||||| | | | || ||| | || |||| |||| ||| | ||||||
Sbjct 245229 GAGGCCAGCTTCTTGAAGTCGAAAGTCCG---CTCTGGCGTGACGTACATGTTGAGGGCG 245173
Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772
|| || ||||| || || || | ||| ||||| |||||||| | | || |||
Sbjct 245172 ATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTG 245113
Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832
|| | ||| | || |||||||||| ||||| || || ||| |||| || ||
Sbjct 245112 CAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCG 245053
Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892
|||||||| |||||||| |||||||| || || || ||||||| || || || | ||||
Sbjct 245052 TCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAG 244993
Query 118893 ACAT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951
| | | || || || | || | | ||| || | ||| || | ||||||||
Sbjct 244992 AGCTGCTGCGCCTTCACCACCCTC-TTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAG 244934
Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGA 119010
|| ||||| || ||| | ||| ||||| || || ||||| || | |
Sbjct 244933 CTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCG-CTGGGACACATCA 244875
Query 119011 GAGACCATTGACCACCCTCCTCA--ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||||| | || | ||| || | ||||||||| ||||| |||||||| | ||
Sbjct 244874 AGGACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGC 244817
Query 119069 CGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 119127
|||| || || | | | ||| || | | || || || || ||||| |
Sbjct 244816 GTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGA 244758
Query 119128 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGA 119183
|||| | | || |||||||||||||||||||| |||| | ||| || |
Sbjct 244757 AGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGT 244698
Query 119184 CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243
| || |||||| || || | || ||| ||| | || | ||||| || | |
Sbjct 244697 TG-CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAAT 244639
Query 119244 CCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGC--TCTGACATCGTGGA 119301
|| | ||| | ||| || || || || || ||| | | || || | |
Sbjct 244638 CCGTTGGAGTTGCCGTTGGTGCCAGCGATGT-AG-CTTCCCGTCGATCGGATGCAGCTCA 244581
Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361
|| || || || || || |||| || || ||||||||| | | || || |||
Sbjct 244580 CCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGT 244521
Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421
|||| || ||||| ||| |||| | | || ||||||||||| |||| || ||||
Sbjct 244520 AGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCC 244461
Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 119480
| || || ||||||||||| || || | |||||| ||||| || | | ||||
Sbjct 244460 GGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAAC-CACTTCTCCGACAGG 244402
Query 119481 TTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 119540
|| ||||||||| | | | ||| |||||| |||||| || || | ||| |||| |
Sbjct 244401 AGGTTGTAGGTCTCGATGGCAGCGTCGATGTCTCGCCCGTGGATCCCAACCGACACCCTC 244342
Query 119541 ATAAACATGT 119550
|| | |||||
Sbjct 244341 ATGAGCATGT 244332
>seq4
Length=1291530
Score = 96.9 bits (106), Expect = 4e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| | | |||||||| || ||| || || ||||||||||| || | |||||
Sbjct 279436 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 279495
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154
||| |||| | || ||| |||||||| |||||||| ||||||||||| ||||| |
Sbjct 279496 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAAATCCCCTCCACTGCTGCGAAAG 279555
Query 130155 CAAAGAGACGCTC 130167
| | ||||||||
Sbjct 279556 CCACAAGACGCTC 279568
>seq577
Length=410616
Score = 89.7 bits (98), Expect = 6e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | ||||| | ||||||||||||||| ||| ||||| |||||
Sbjct 150344 TAGATGTTGCTTGTGTACGCCTCAATGGACTCATTGTTACCCAGGATCTGGGCAGTGGAA 150403
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||||||||| || |||| || || |||||
Sbjct 150404 GCTGTGGGCATCGGGGCCAAAAGCAGACTGTT 150435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618296144845280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |