Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq990 93.3 5e-14
seq86 87.8 2e-12
>seq990
Length=431866
Score = 93.3 bits (102), Expect = 5e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| ||||| ||| ||||| ||||||||||||||||| ||| ||| || | |||||
Sbjct 238343 GCCTTTGCTGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCCATCTTCTGGCTG 238402
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
|||||| |||| || ||||| || || |||| ||||||||| ||| ||| ||||||
Sbjct 238403 AAGAAGAGAGGCCTGATGCCTGGCCTAACCTTCAGCAACGAGCTCATCAGTCGAGACGAG 238462
Query 94936 G 94936
|
Sbjct 238463 G 238463
>seq86
Length=659436
Score = 87.8 bits (96), Expect = 2e-12
Identities = 562/889 (63%), Gaps = 49/889 (6%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||| | ||| | | || || || ||| |||||| || ||| |
Sbjct 244325 CCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATCGACGCTGCC 244384
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || |||| | | || ||||| ||||| | || ||||||||
Sbjct 244385 ATCGAGACCTACAACCTCCTGTCGGAGAAGTG-GTTCACCCACGCCTCTCCGACCCTCTT 244443
Query 104341 CAATGCTGGTAC--ACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398
||| || || || ||| | || || ||||||| |||||||| || ||| |||||
Sbjct 244444 CAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGGAC 244501
Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458
||| ||| | || ||||| | || || | | |||| |||| || || |||| |||
Sbjct 244502 GACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCT 244561
Query 104459 GGGGGTATTGG---------GATGCACATCC-AT-GATGTGAGAGCCAATAAATCTCGTA 104507
|| || || || || ||||| || || | || ||| || ||| |
Sbjct 244562 GGCGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGA-AGC---TACATCGC--- 244614
Query 104508 TTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCA 104567
|| || || || | || | || | | || ||||| | || | ||| ||
Sbjct 244615 ----TGGCACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACA 244670
Query 104568 CAGCGCGCTATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTAT 104620
| || ||||| | || | | ||||| | | ||| || | |||| | ||
Sbjct 244671 CGGCTCGCTACG----TCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTCGCCATGTAC 244726
Query 104621 CTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGAC 104680
|| || || |||||| || | | || ||||| ||| || ||| ||| |
Sbjct 244727 CTGGAACCGTGGCACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAG 244786
Query 104681 GAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAG 104740
|||||| | | | | || || |||| ||| | ||||| || || || |||||||||
Sbjct 244787 GAGGAGCAGAGAGCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAG 244846
Query 104741 AGAGTTGAGGAGAGTGGC---AATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTC 104797
||||| |||||| | | ||||| | | ||||| | || || || ||
Sbjct 244847 AGAGT---GGAGAGCAACCAGGACTGGTCCTTGATGTGTCCCAGCGAGTGTCCCGGGCTG 244903
Query 104798 TCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG 104856
||| ||| | ||| |||||||| || || ||||| | || ||| | ||||| |
Sbjct 244904 GACGAGTGCTG-GGGAGAGGAGTTCGAGAAGCTCTACACCAGATATGAGAAGGAAGGGAG 244962
Query 104857 GGCGACTGCGACGGTGCCAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCG 104915
|| || | |||| || || | | | ||| | || || || |||| || ||||
Sbjct 244963 GGTGAAGAGGGTGGTG-AAGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCCCAGACCG 245021
Query 104916 AGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGA 104975
| || || || || |||||||| ||||| ||||| || ||| ||||| || || |||
Sbjct 245022 AAACCGGGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGA 245081
Query 104976 ATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAG 105035
| |||| ||||| | ||| ||||| ||||| | |||| | || ||| |
Sbjct 245082 ACCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGG 245141
Query 105036 ATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084
| ||| ||| || || ||||| || || ||||| ||| || ||| ||
Sbjct 245142 ACGAGGTGGCCGTCTGCAACCTGGCCTCCATCGCCCTCAACATGTACGT 245190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583129653809120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |