Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq86 210 2e-49
seq2100 167 3e-36
seq722 152 6e-32
seq577 113 5e-20
seq1241 87.8 2e-12
>seq86
Length=659436
Score = 210 bits (232), Expect = 2e-49
Identities = 821/1267 (65%), Gaps = 44/1267 (3%)
Strand=Plus/Minus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCT--CCGACGCCGGAGACCCCGCGAACGTCTCGTA 80597
|||||||||||| ||| | |||||||| | |||| || || ||| || | ||||||||
Sbjct 245540 CCCACATGTCGTACTGGAGGATGCCCTTACTGACG--GGCGAGCCCTCGTATGTCTCGTA 245483
Query 80598 CGGGCCCTCCGTCTT-GGCCAGCTCACAC---GACTCCATAAGGGCCGCGTGATAAATGC 80653
||||| | ||| ||| || || || | ||||| |||| ||||| || |||
Sbjct 245482 GGGGCCGAGC-TCTGCGGCGAGTTCGCAGCTGGCCTCCA---GGGCGGCGTGGTAGATGG 245427
Query 80654 ACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGT-CGAACGACAAGCCCATC 80712
||| |||| |||| | | || | || ||| | | |||||| | ||||
Sbjct 245426 TCTCGAAGATCTGGATGTTGAG-CAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATC 245368
Query 80713 ATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTC 80772
| ||||| | || ||||| ||||| |||||||| ||||||| | ||||||||||||
Sbjct 245367 AGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTG 245308
Query 80773 GATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGT 80832
|| |||||| || || | ||||| |||| | ||||||| ||| ||||| |
Sbjct 245307 GACGTCTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTT---T 245251
Query 80833 GTAACAAC--CCGTG-TAACATCATGAAGTTTCTGAAAGTCGAA--TTGGTTCCC-CTTC 80886
| || | || || | || || |||| |||||||| | | || | |
Sbjct 245250 TTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGGCGTG 245191
Query 80887 AC--AAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA--GCATC 80942
|| | ||| | ||| | ||| ||||| ||||| ||||||||||| || ||
Sbjct 245190 ACGTACATGTTG--AGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGG 245133
Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002
|||| ||| || | || ||||| | || | || || || |||||||| | |||
Sbjct 245132 TGTA--CTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTG 245075
Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062
||| ||| ||||||||||||||||||| |||||| || || ||||| ||| |||
Sbjct 245074 GTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTG 245015
Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122
|||| || |||||||| ||| | || ||||||| |||||| | | | |||||
Sbjct 245014 GGACTCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTC 244955
Query 81123 GGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTG 81181
| |||| ||| ||| |||||| ||||||| | || || || | |
Sbjct 244954 CTTCTCATATCTGGTGTAGAGCTTC-TCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGG 244896
Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241
| |||||| | || ||||||| | |||||| || | |||| || |||||||||
Sbjct 244895 GACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACA 244836
Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGT 81301
||| |||||||| | |||| ||| ||||| | | | | |||||| | || ||
Sbjct 244835 GGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGT 244776
Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361
| || ||| || ||||| | | ||| ||||| || ||||| |||| |||||
Sbjct 244775 TCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGA 244716
Query 81362 TCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415
| ||| |||| ||| ||||||| |||||| || || || ||| | |
Sbjct 244715 AGGCCCCGGGTCTCTTG---TTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAA 244659
Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475
| | || ||| |||| | || | || | ||||| || || |||| |||
Sbjct 244658 CTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCAGCGATGTAGCTTCCCG 244599
Query 81476 TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCAC 81535
| | || | ||| | | | ||||| || || | |||| ||||| | || |
Sbjct 244598 TCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGCGCGC 244539
Query 81536 ACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAAC 81595
|| | |||| ||| || || || || |||||||| || | |||||| |||| ||| |
Sbjct 244538 ACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGC 244479
Query 81596 AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGA 81655
|||| |||| ||| || | || | ||||| ||||| || || || | ||||| |||
Sbjct 244478 AGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGA 244419
Query 81656 AATAACGGTTTGACATCAGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGA 81714
| | | |||| |||| ||||| || || | |||| | || || |||||
Sbjct 244418 ACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCG-ATGTCTCGCCCGTGG 244360
Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCGCCTGCGTTCAGGTACATC 81774
|| || | | || | ||| | ||||| ||| ||| |||| | | ||| || |||
Sbjct 244359 ATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATC 244300
Query 81775 TTCTGCA 81781
||| |||
Sbjct 244299 TTCAGCA 244293
>seq2100
Length=111253
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || |||||||| || || || || ||||| ||| | |
Sbjct 23842 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGCCCAGC 23783
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| ||||| ||||| |||||||| || || || ||||||
Sbjct 23782 GACACCATTGAGAACGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 23723
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || |||||||| ||||| || || |||| || ||||| | ||||| |||
Sbjct 23722 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAT 23663
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||| |||||||| || || || || | ||||| | |||||
Sbjct 23662 ATCCAAAAAGAATCCACCCTCCACCTTGTTCTCCGTCTGAGGGGTGG 23616
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||||||| | |
Sbjct 23614 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGCCCAGC 23555
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||| |||||||| || || || || |||
Sbjct 23554 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGATCAG 23495
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | || || ||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 23494 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 23435
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| ||||| || ||| | ||||| | |||||
Sbjct 23434 ATCCAGAAGGAGTCCACCCTTCACCTGGTCCTCCGTCTCAGGGGTGG 23388
>seq722
Length=280156
Score = 152 bits (168), Expect = 6e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || || || ||||| || || || ||||| ||| | ||
Sbjct 191954 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCCAGT 192013
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || ||||||| || |||||||| || || || |||||||| ||||||
Sbjct 192014 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGACCAG 192073
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | ||||| ||||||||||| || || || |||| || ||||| | ||||| |||
Sbjct 192074 CAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTACAAT 192133
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| || || || ||
Sbjct 192134 ATCCAGAAGGAGTCCACCCTCCACCTGGT 192162
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || || || || |||||||| || || ||||| ||| | ||
Sbjct 192182 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACTATCACCCTGGAGGTGGAGCCCAGT 192241
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || ||||||| || |||||||| || || | |||||||| ||||||
Sbjct 192242 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGACATTCCTCCTGACCAG 192301
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | ||||| ||||||||||| || || || |||| || ||||| | ||||| ||
Sbjct 192302 CAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAAAAC 192361
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| || || || ||
Sbjct 192362 ATCCAGAAGGAGTCCACCCTCCACCTGGT 192390
>seq577
Length=410616
Score = 113 bits (124), Expect = 5e-20
Identities = 118/155 (76%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009
|||||||| || ||||| | ||| ||||| || || ||||| |||| |||||| | |
Sbjct 151948 TCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGTGCCCAGATTTTGCTGGTTGGTC 152007
Query 81010 TTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTG 81069
|| |||||| |||||||||||| ||||||||| ||||| ||||| ||| |||| |
Sbjct 152008 TTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTCTCTGTCTGCGACTCG 152067
Query 81070 AGGATGGCGTCCCAAATCTCGCGCGCCTTGACCAC 81104
| |||||||| ||| | || | ||||| |||||
Sbjct 152068 ATGATGGCGTACCAGAGCTGCTGAGCCTTCACCAC 152102
>seq1241
Length=338012
Score = 87.8 bits (96), Expect = 2e-12
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184
|||||||| ||| | || ||||||||||| || || ||| ||||| | || ||||
Sbjct 152710 ACCATTGTGAACTTAGCCCAGAACTTTGTGGGCAGCAACAACGTGAACATCCTGCAGCC- 152652
Query 32185 TCTGGA-CAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACAT 32243
||||| |||||||| || || | || ||||| |||||||| ||| ||||||||||
Sbjct 152651 TCTGGGTCAGTTTGGTACTCGCATTAATGGAGGCAAAGATGCTGCCAGCCCCCGTTACAT 152592
Query 32244 CTTCACC 32250
|||||||
Sbjct 152591 CTTCACC 152585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570182165706560
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