Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 102 5e-17
seq722 96.9 2e-15
>seq2100
Length=111253
Score = 102 bits (112), Expect = 5e-17
Identities = 164/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | |||| ||||| ||| || || || ||||| || || ||
Sbjct 27577 GCCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGA 27636
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || |||||||| || | | ||| ||||| || ||
Sbjct 27637 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 27696
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| |||||||| || |||||| | ||||| | ||| ||||| | |||||
Sbjct 27697 GATGCCCTCCTTATCCTGGATCTTG-GCCTTAACATTCTCAATGGTGTCACTGGGCTCCA 27755
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
| || | ||| || ||||| ||||| | ||||||||||| |||||||| |||
Sbjct 27756 CCTCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTTG 27808
Score = 91.5 bits (100), Expect = 9e-14
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | || | ||||| ||| || ||||| || || || || ||
Sbjct 23615 GCCACCCCTCAGACGGAGAACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGA 23674
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 23675 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGG 23734
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| |||||||| || ||| ||| | || ||| | ||| ||||| | |||||
Sbjct 23735 GATGCCCTCCTTATCCTGGAT-TTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCA 23793
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
| |||| ||| || ||||| ||||| | || || ||||| |||||||||||
Sbjct 23794 CCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTT 23845
>seq722
Length=280156
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || || | ||||| ||||| ||| |||||| || || || || || ||
Sbjct 192181 GCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGA 192122
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || |||||||| ||||| |||| | ||| ||||| || ||
Sbjct 192121 CAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGG 192062
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| || || || || |||||| | || ||| | ||| || || | |||||
Sbjct 192061 AATGCCTTCTTTATCCTGAATCTTT-GCCTTCACGTTCTCAATGGTATCACTGGGCTCCA 192003
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
| |||| ||| || || || || || | |||||||| ||||||||||| ||
Sbjct 192002 CCTCCAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 191951
Score = 91.5 bits (100), Expect = 9e-14
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
||||| ||||| ||| |||||| || ||||| || || || || || || | |||||
Sbjct 192391 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCATCTTC 192332
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
|| |||||||| ||||| |||| | ||| ||||| || || | | || || ||
Sbjct 192331 CAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCCTG 192272
Query 34617 GATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675
|||||| | || ||| | ||| || || | |||||| |||| ||| || || |
Sbjct 192271 AATCTTT-GCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGTCT 192213
Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || || | |||||||| ||||||||||||
Sbjct 192212 TCCCAGTGAGGGTTTTCACGAAAATCTGCATG 192181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314660602223204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |