Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq60 132 4e-26
>seq60
Length=641354
Score = 132 bits (146), Expect = 4e-26
Identities = 128/162 (79%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC-GCGAA 34623
|| ||||| | |||||||| ||||| ||||| ||||||| || ||||||||| ||||
Sbjct 476410 GACCTCCCCATCATGGCGCTGCCCCCCTGCCATGCCCTCTGTCAGTTCTACGTCTGCGAC 476469
Query 34624 TGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTT 34683
|||||||||||||| ||||| || || || || | |||||||| | || ||||| ||
Sbjct 476470 -GGGGAGCTGTCCTGTCAGCTGTACCAGCGCTCCGCCGACATGGGTCTGGGCGTGCCTTT 476528
Query 34684 CAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
|||||| || || ||||| || ||||| |||||||| || ||
Sbjct 476529 CAACATCGCCAGCTACGCACTTCTCACCTACATGATTGCACA 476570
Score = 132 bits (146), Expect = 4e-26
Identities = 128/162 (79%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || |||||||| ||||| || ||||| || || |||||||| ||||| || | |||
Sbjct 476570 TGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGCACGCCCAGACCC 476511
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC-GACGTAGAATTG 6738
||||| | || || || || ||||| |||||||||||||| |||| ||||||||| ||
Sbjct 476510 ATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCC-GTCGCAGACGTAGAACTG 476452
Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| ||||| ||||| |||||||| | ||||| ||
Sbjct 476451 ACAGAGGGCATGGCAGGGGGGCAGCGCCATGATGGGGAGGTC 476410
Score = 104 bits (114), Expect = 2e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| |||||||||||||| || ||||||| || ||||| |||||||| | ||| ||| ||
Sbjct 475550 GGAGTGAAGATCTGGGATGCCAACGGGTCCCGTGACTTCCTGGACAACCTGGGCTTCACA 475609
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
|||||||||| || |||| || || || || ||||| ||||| |||||||| ||
Sbjct 475610 GAGAGGGAGGAGGGGGATCTGGGACCTGTGTATGGTTTCCAATGGAGGCACTTTGGTGCA 475669
Query 34442 GAGTA 34446
|||||
Sbjct 475670 GAGTA 475674
Score = 104 bits (114), Expect = 2e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
||||| || |||||||| ||||| ||||| || || || || |||| || |||||||||
Sbjct 475674 TACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCCCTCCTCC 475615
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| || ||| ||| | |||||||| ||||| || ||||||| || ||||||||||||
Sbjct 475614 CTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCCCAGATCTTC 475555
Query 7019 ACCCC 7023
|| ||
Sbjct 475554 ACTCC 475550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448161608199360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |