Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq722 100 2e-16
seq2100 96.9 2e-15
>seq722
Length=280156
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| ||||||||||| || || || ||||| || || || || ||
Sbjct 191951 AAGATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACCATCACCCTGGAGGTGGAGCCC 192010
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || |||| | | || ||| ||| || |||||||| | || || ||
Sbjct 192011 AGTGATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGGCATTCCTCCTGAC 192070
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | |||| ||||| || ||||| |||||||| | ||||| | || |||
Sbjct 192071 CAGCAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAC 192130
Query 23788 AACATACAAAAAGAGTCCAC 23807
|| || || || ||||||||
Sbjct 192131 AATATCCAGAAGGAGTCCAC 192150
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| ||||||||||| || || || ||||| || || || || |||
Sbjct 192182 ATGCAGATTTTCGTGAAAACCCTCACTGGGAAGACTATCACCCTGGAGGTGGAGCCCAGT 192241
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || ||| ||| || ||||||| | || || || ||
Sbjct 192242 GATACCATTGAGAACGTGAAGGCAAAGATTCAGGATAAAGAAGACATTCCTCCTGACCAG 192301
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | |||| ||||| || ||||| |||||||| | ||||| | || || |||
Sbjct 192302 CAGAGGCTAATCTTTGCTGGTAAACAGCTGGAAGATGGCCGCACCCTGTCGGACTAAAAC 192361
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 192362 ATCCAGAAGGAGTCCAC 192378
>seq2100
Length=111253
Score = 96.9 bits (106), Expect = 2e-15
Identities = 144/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| || || ||||||||||| || ||||| ||||| || || || || ||
Sbjct 27807 AAGATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCC 27748
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| ||| |||| | || || || || || || | || || ||
Sbjct 27747 AGTGACACCATTGAGAATGTTAAGGC-CAAGATCCAGGATAAGGAGGGCATCCCCCCTGA 27689
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||| | | || |||||||| || || |||||||| | ||||| | ||| ||
Sbjct 27688 CCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTA 27629
Query 23787 CAACATACAAAAAGAGTCCACA 23808
|||||| || ||||| ||||||
Sbjct 27628 CAACATCCAGAAAGAATCCACA 27607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337935498577904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |