Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq60 141 8e-29
seq4888 96.9 3e-15
>seq60
Length=641354
Score = 141 bits (156), Expect = 8e-29
Identities = 129/163 (79%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || || | ||| || |||||||| ||||| || | ||||||||||||||| || |||
Sbjct 476582 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 476523
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || |||||||| | || | |||||| ||||| || || ||||| |||||||
Sbjct 476522 ACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAGGACAGCTCCCCGTCGCAG 476463
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGA 29876
||||| |||||||| | ||||||||| || || || |||||||
Sbjct 476462 ACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGA 476420
Score = 120 bits (132), Expect = 2e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||||||| ||||| || ||||| |||||||| || ||||| ||||| | ||||
Sbjct 475662 AAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCCCTCCTCCCTCTCTGTGAAG 475603
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||||||| ||||| | ||| |||||||| ||||||||||| || || |||||
Sbjct 475602 CCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATCCCAGATCTTCACTCCTTTCTCT 475543
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| ||||| |||| ||||| || ||
Sbjct 475542 GACAGCTCCTTGGCATTTGTTGATCC 475517
>seq4888
Length=17061
Score = 96.9 bits (106), Expect = 3e-15
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348
||||||||||||||| | ||| | |||| || |||| || || ||||| || ||||| ||
Sbjct 10818 CTCCCTGCTGAGGACGATGTTGATCCTGCCTTTCAGTGGCCTGTTCTTCTCTGGGATTGA 10877
Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|||||| ||||| || ||||| |||||||| |||| | | |||
Sbjct 10878 GAACCAGGTCTTCCTGCCCATGATCACCACATTCTTCCTGCCT 10920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406074157349368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |