Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq86 374 1e-98 seq577 96.9 5e-15 >seq86 Length=659436 Score = 374 bits (414), Expect = 1e-98 Identities = 1263/1955 (65%), Gaps = 29/1955 (1%) Strand=Plus/Minus Query 75656 TTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTA 75715 ||||| ||||| || ||||||| | ||| || | | | ||||| ||||| || Sbjct 245796 TTCTTCATCTCCTCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTG 245737 Query 75716 ACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCC 75775 || || || || ||||| |||| || || || ||||| || || ||||| || | || Sbjct 245736 ACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCG 245677 Query 75776 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAAT 75835 | || || ||||| |||| || || || || || || || ||||| || |||| || Sbjct 245676 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGC 245617 Query 75836 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 75895 | || || || | || ||| | ||| || || || || ||||| ||||| || Sbjct 245616 AGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 245557 Query 75896 TCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCA 75955 || | || ||||| | ||||| || || || || || || | || || Sbjct 245556 TCGGTCGGCGTCTTCTCCCACATGTCGTACTGGAGGATGCCCTTACTGACGGGCGAGCCC 245497 Query 75956 TTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCG 76015 | ||||| ||||| | ||| || | | || |||||||| || ||||| | || || Sbjct 245496 TCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCG 245437 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGA 76075 | || || || ||||| |||| | || || || ||||| | || || || ||| Sbjct 245436 TGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGA 245377 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | || || || ||||| || || ||||| || || || || || || || || Sbjct 245376 TGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGG 245317 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||| ||||| | || ||||| || | ||||| || || || || || || || ||| Sbjct 245316 CGCTTGTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAGTTGATGTCGATGATCTTGTTG 245257 Query 76196 AGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT 76255 || ||| | || | ||| || ||| || || || || || | | ||| Sbjct 245256 AGGTTTTTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCT 245197 Query 76256 ATC---ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--TAG 76310 | || |||| || || || || || || || || || ||||| ||||| | | | Sbjct 245196 GGCGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTG 245137 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | ||| || | | | ||| ||||| || || || || ||||| || || || || | Sbjct 245136 C--TGGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCT 245079 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 | ||||||||||| |||| || | |||||| || || | | || || || ||||| Sbjct 245078 GCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGG 245019 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTA--TC 76487 |||| || ||||| || | | ||||| | || || || | | || || Sbjct 245018 TCTGGGACTCGATGATGGCGTACCAGA-GCTGCTGCGCCTTCACCACCCTCTTCACCCTC 244960 Query 76488 GCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCA 76547 |||| ||| ||||| || || | | || || || |||||||| || |||| Sbjct 244959 CCTTCCTTCT--CATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCA 244902 Query 76548 AACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCA 76607 || ||||| || | ||||||||||| ||||| || | || || | |||| Sbjct 244901 GCCCGGGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCA 244842 Query 76608 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTC 76667 | || || || || ||||| | || || || |||| || ||| | || || |||| Sbjct 244841 TGAACAGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTC 244782 Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727 |||| ||||| || || || ||||| || | | || | ||||| ||||| || || | Sbjct 244781 CTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACA 244722 Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787 | || | | || |||| || || || ||||| || | || | || ||||| || | Sbjct 244721 TGGCGAAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGT 244662 Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847 ||||||||| ||| || | | ||||| || | || || || |||| || || |||| Sbjct 244661 AAACTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCAGCGATGTAGCTTC 244602 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 | | || || || | | | ||| || || || || || || || || | Sbjct 244601 CCGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCGCCAGCGGACTTGGAAATGAGCG 244542 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 | || | |||| ||||| |||||||| || || || || ||| ||||| | || || | Sbjct 244541 CGCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGA 244482 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 | ||||| |||| || | | || || || || || | || ||||| || || | Sbjct 244481 AGCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGG 244422 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGAT 77087 ||||||| || || || || || ||||| || || || | || || || || | | Sbjct 244421 TGAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCGATGTCTCGCCCGT 244362 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | || || || | || | ||| | ||| ||||| || || || | || || | Sbjct 244361 GGATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGA 244302 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 77207 | |||| || ||| || |||| ||| || ||||| || ||||||| || || |||| Sbjct 244301 TCTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTC 244242 Query 77208 TTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAG 77267 | || ||||| || ||||| || |||||| | || | || || || || | Sbjct 244241 TGTCATAAATGATGGAGGAATTAAGGCGGTCCTTGTTTTCCATGACGATGTC---GAGCG 244185 Query 77268 T---GGTAGAAATAATTGGAGATCGTATTCCATTTTT----AGGATTAACATAGTTAAAT 77320 | | || || || ||||| | || ||| | ||| || || ||| || Sbjct 244184 TCTCCTTGGAGATCATGGGAGA----GTGCCGTTTGTTCAGAGGGTTGACGTAGGCGAAC 244129 Query 77321 AAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCT 77380 | ||||||||| || ||||| || | || || || |||||||| || || || ||||| Sbjct 244128 AGGTCTTCCATCACCTCGCTGAACACCTTCTTGGTCTCCTTGTGCAGGTTGGAGACGGCA 244069 Query 77381 ATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCT 77440 || || || || || || || ||||| || |||| || || |||||| || || || Sbjct 244068 ATCCTCGCGGCCAGGATGGCGTAGTCGGGGTGTTTGGTCGTCAGGGTGGCCGCGATCTCC 244009 Query 77441 GCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTC 77500 ||||||| || |||| || | || || || ||| | || | || || || || ||| Sbjct 244008 GCCGCTAGCGTGTCTAGCTCCACGGTGGTGACGCCGCTGTACAAGCCCTGGATCACCTTC 243949 Query 77501 ATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCT-AAT 77559 |||| || | ||||| ||||| || | ||||| || || || || |||| || Sbjct 243948 ATGGTGATCTGAGCCGGATCCACAAAGTCCGGGTTCAGGCCGTAGCA-AAGCTTCTGGAT 243890 Query 77560 ACGAGATGTGATTTTATCAAACATGACATTCTCCT 77594 || || ||||||||||| |||||||| ||||| Sbjct 243889 GCGGGAGGTGATTTTATCGAACATGACGCGCTCCT 243855 >seq577 Length=410616 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || || || |||| |||||||| || ||||||||||| || || ||||| || ||| Sbjct 153456 GTGCCGGCGTTGAACAGGGTAGGAGACGCGTGAGTGAACCACTTCTCTGAAAGCAGGTTG 153515 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||| | |||| || || || || ||||| || || || || | ||||| | Sbjct 153516 TATGTTTCAACAGCTGCATCAATGTCTTCTTTGTGAATCCCGACTGCCACTCTCATCAGC 153575 Query 77114 ATATGCTGAGGTC 77126 || ||||| |||| Sbjct 153576 ATGTGCTGGGGTC 153588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712774096700160