Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 136 9e-27
seq722 100 7e-16
>seq2100
Length=111253
Score = 136 bits (150), Expect = 9e-27
Identities = 170/230 (74%), Gaps = 10/230 (4%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||| || || || || || ||||| ||||||||||| |||| | ||
Sbjct 27583 CCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGACAGGGT 27642
Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000
| |||||||| || ||||| ||||| ||||| |||||||||||||| | | |||
Sbjct 27643 GCGGCCATCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATG 27700
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACT 152057
|| ||||| || || || || || ||| |||| | | |||| ||| ||| ||
Sbjct 27701 CCCTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTC---ACTGGGCTCCACC 27757
Query 152058 TCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| || || |||||||| ||||| || ||||| |||| |||||| ||
Sbjct 27758 TCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTT 27807
Score = 134 bits (148), Expect = 3e-26
Identities = 168/227 (74%), Gaps = 10/227 (4%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| ||||| || || ||||| ||||||||||||||||| || | | ||
Sbjct 27355 CCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGGGT 27414
Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000
| |||||||| || ||||| ||||| ||||| |||||||||||||| | | |||
Sbjct 27415 GCGGCCATCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATG 27472
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACT 152057
|| ||||| || || || || ||||| |||| | | |||| ||| ||| ||
Sbjct 27473 CCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACC 27529
Query 152058 TCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || |||||||| ||||| ||||| ||||||| ||||||
Sbjct 27530 TCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 27576
Score = 123 bits (136), Expect = 6e-23
Identities = 163/224 (73%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||| || ||||| || ||||| || ||||||||||| || | | ||
Sbjct 23393 CCTGAGACGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 23452
Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000
| |||||||| || ||||| ||||| ||||| ||||||||||| || | | |||
Sbjct 23453 GCGGCCATCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGATCAGGGGGGATG 23510
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060
|| ||||| || || || || ||||| |||| | | |||| ||| || ||
Sbjct 23511 CCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCC 23570
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| ||||| ||||| ||||||| ||||||
Sbjct 23571 AGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 23614
Score = 120 bits (132), Expect = 7e-22
Identities = 164/227 (72%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| ||||| || || || || ||||||||||| ||||| || | | ||
Sbjct 23621 CCTCAGACGGAGAACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGT 23680
Query 151943 TCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATT 152000
| |||||||| || ||||| || || ||||| |||||||||||||| | | |||
Sbjct 23681 GCGGCCATCTTCCAGCTGCTTT--CCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATG 23738
Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060
|| ||||| || || ||||| ||||| |||| | | |||| ||| || ||
Sbjct 23739 CCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCC 23798
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || |||||||| ||||| ||||| || |||| |||||| ||
Sbjct 23799 AGGGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTT 23845
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| ||||| || || ||||| ||||| ||||||||||| || | | ||
Sbjct 23165 CCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGGGT 23224
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || || ||||| |||||||||||||| | | ||| ||
Sbjct 23225 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 23284
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||||| || || ||||| ||||| |||| | | |||| || || || ||
Sbjct 23285 CTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCACCTCCAG 23344
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || |||||||| ||||| ||||| ||||||| ||||||
Sbjct 23345 GGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 23386
>seq722
Length=280156
Score = 100 bits (110), Expect = 7e-16
Identities = 164/234 (70%), Gaps = 7/234 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| || || || || || ||||| || ||||| ||||| || | | ||
Sbjct 192175 CCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGACAGGGT 192116
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || ||||| |||||||||||||| | | || ||
Sbjct 192115 GCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCC 192056
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||| || || ||||| ||| || || |||| | | | || ||| ||| || ||
Sbjct 192055 TTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATC---ACTGGGCTCCACCTC 191999
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTACCCT 152112
|| || || || || || ||||| || |||||||| | |||||| ||||| ||
Sbjct 191998 CAGGGTGATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATCTTTACACT 191945
Score = 96.9 bits (106), Expect = 8e-15
Identities = 157/225 (70%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| || || || || || ||||| || |||||||| || || | | ||
Sbjct 192403 CCTCAGGCAGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGACAGGGT 192344
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| |||||||| || ||| || || ||||| |||||||||||||| | | || |
Sbjct 192343 GCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGTC 192284
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||| || || ||||| ||| || || |||| | | | || ||| ||| || ||
Sbjct 192283 TTCTTTATCCTGAATCTTTGCCTTCACGTTCTCAATGGTATC---ACTGGGCTCCACCTC 192227
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || || ||||| || |||||||| | ||||||
Sbjct 192226 CAGGGTGATAGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCAT 192182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153554877477948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |