Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq2088 178 2e-39
seq646 123 4e-23
seq1522 107 3e-18
>seq2088
Length=212312
Score = 178 bits (196), Expect = 2e-39
Identities = 207/278 (74%), Gaps = 1/278 (0%)
Strand=Plus/Minus
Query 8310 CCTTGA-CGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCC 8368
|||||| ||||| | || || || ||| | | ||| | |||||||| | || ||
Sbjct 147493 CCTTGAACGTTGTTGCAAACCAGCCTCTGCAGGGAGGCGGTGTTGACGATGTCAAAGCCG 147434
Query 8369 ACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATG 8428
|| || || ||||||||||||||||||||| | || ||||| ||| ||| ||||
Sbjct 147433 ACTGAGCCTCCAAAGGTGCTGGGCTTCCAGTACTCTGGCGAGCAAATGGGATTCCCCATC 147374
Query 8429 AGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTG 8488
||||||||||||||||| |||||||||| ||| | || |||| || || ||||||||
Sbjct 147373 AGGCCTTTGAGGGAGAAAGGAGCCCCCATCTCCACCATCGTCTCCCCAAAAATGGCGTTC 147314
Query 8489 GGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAA 8548
|| |||||||| ||||| | | |||| ||| ||||||||||| |||||||| |||||
Sbjct 147313 GGCCGGGGCTTCTCCACAAGCAGGCCGGGGTAGAGCTCCACAGCGTCGACGTCACCGTAC 147254
Query 8549 AGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
|| | ||| ||| || || || || ||||||||
Sbjct 147253 AGCTCTTCCAGTATGGCGGCCATTTCTTTGTCTCCTGT 147216
Score = 129 bits (142), Expect = 8e-25
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| || |||| |||||| |||| ||||| || ||| |||||| ||| ||||| ||
Sbjct 145899 TCACCAATAAGGATGAGCCGAGAAGTCTGAAAGAGTCTTTCGTCATCCCAGTCTGGGTGA 145840
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
||| |||| ||| || ||||||| |||||| || | ||||||||| ||||||||||||
Sbjct 145839 ACTTCCTTCAAAACGTCACACACCCGGTTGTGCTCACGGAGCCAGATGGTGGCGTACATC 145780
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGC 9392
||||| || || ||||| || || ||||| || || |||||
Sbjct 145779 ATGAGGCCTGGGACCAGACCGAACGCCTCGTGGCCAACAGC 145739
Score = 96.9 bits (106), Expect = 5e-15
Identities = 110/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 9905 AAGTCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTT 9964
|| |||||| ||| || | ||| ||||| || || ||||| ||||| || |
Sbjct 144939 AACTCACCTACGACTCCCATAGGGGTTGGGCAGTCCGCCGGAACTGGAGGAAGGGCACGA 144880
Query 9965 GCGTAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAT 10024
| ||| ||||| || ||||| | |||||||||||| |||| | ||||||||||||||
Sbjct 144879 GTGTAGTAGGATAGGTTGGAATAGGCTTCCCAGCTTTTGTATCCATAGTCCGCGTTGTAA 144820
Query 10025 ATGGGAGGGCTGTCAATCAAATCGGATC 10052
| ||||| |||||||||| || |||||
Sbjct 144819 GTAGGAGGACTGTCAATCATATGGGATC 144792
>seq646
Length=297705
Score = 123 bits (136), Expect = 4e-23
Identities = 176/248 (71%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362
||||||| |||| ||| |||||| || || | ||| | | |||| ||| |
Sbjct 224458 GGACACCACTTGGTGTTCAGACAGACCAGTTTCTTCAGAGTCGATGTTTTGATGATGTTG 224517
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||| || || |||||||||||||||||||||||| | || ||| |||| |||
Sbjct 224518 AAGCCCGTCTCGCCTCCGAAGGTGCTGGGCTTCCAGTACTCTGGAGAGTTGATGGGATTC 224577
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
| | |||||||| |||||||| || || |||| ||| | |||||||| ||||| |||
Sbjct 224578 CCAAGCAGGCCTTTCAGGGAGAAAGGGGCTCCCATCTCCACCATGCTCTCTCCGAATATG 224637
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542
| |||||| || | || |||| || || || | || | ||||| || || | |||
Sbjct 224638 GAGTTGGGGCGAGTTTTCTCCATCATGAGGCCAGGATAAAACTCCAGGGCGTCAATGTCA 224697
Query 8543 CCGTAAAG 8550
||||| ||
Sbjct 224698 CCGTAGAG 224705
Score = 118 bits (130), Expect = 2e-21
Identities = 125/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294
|| ||||||||||||| ||||||||||| || ||||||||| ||| ||||||||
Sbjct 231202 CCAATAATGATGAGTCTGGTGGTCTGGAAAAGCTGCTCGTCATCCCAGGTCGGATGTTCG 231261
Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354
||||| | || ||||||| |||||| ||||| |||||||| ||||||||||| ||
Sbjct 231262 CCCTTCAGGATGTCACACACCCGGTTGTGCTCCCTCAGCCAGATGGTGGCGTACATGGTG 231321
Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGC 9399
|| || || || || || || | || || |||| || || |||
Sbjct 231322 AGGCCTGGGACAAGTCCGAACACTTCCTGTCCGATGGCGAGCCGC 231366
>seq1522
Length=231901
Score = 107 bits (118), Expect = 3e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
|| ||||| |||| || || | || ||||| ||||||||||||||||| | ||||||
Sbjct 122328 TTCACGATGTCGAAGCCGACCTTGCCTCCGAATGTGCTGGGCTTCCAGTATTCTGGGGAG 122269
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|| ||| ||| ||| ||||||||||||||| || || || |||| || | |||||
Sbjct 122268 CATATGGGGTTACCCAGGAGGCCTTTGAGGGAAAAGGGGGCGCCCATTTCCACCATGCTT 122209
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| ||||| || || || || | ||| |||| || || |||| ||| | || | |
Sbjct 122208 TCTCCGAATATCGCCCCTGGTCGAGTCTTCTCCAGCAGTAACCCGGGGTAAAATTCAAGA 122149
Query 8531 GCCTCGA 8537
|| ||||
Sbjct 122148 GCGTCGA 122142
Score = 84.2 bits (92), Expect = 3e-11
Identities = 172/256 (67%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| ||||| | ||| || || || || ||||| || ||||| || ||| |||||
Sbjct 118876 TCACCGATGACGATAAGGCGGGTCGTTTGGAAGAGCTGCTCATCGTCCCAGGTCGGATGC 118817
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
||| |||||| || || || || |||||||| ||||||||||| | ||||||||||
Sbjct 118816 TCTGCTTTCAGGACGTCACAGACTCTGTTGTGCTCCCTGAGCCACAGTGTGGCGTACAAA 118757
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411
| ||||| | || || || |||| ||||| | |||| | | | | |||
Sbjct 118756 CCCAAACCAGGAAGGAGCCCGAACACCTCCTGACCAATGGCCATCTGTCTCTCCGCCGGC 118697
Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471
|| ||||||| ||| |||| | | |||| || || || || ||||||||
Sbjct 118696 ACCCCGGGAGGGTAGCTCATCCTGATGGGAGCGTCAACTACAGATGGAGGGTACATTTCT 118637
Query 9472 CCGTCAATCATCTGAT 9487
|| || | || |||||
Sbjct 118636 CCATCGACCAACTGAT 118621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716715610251520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |