Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13]
17,988 sequences; 815,144,743 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq2100 122 8e-23
seq722 105 6e-18
>seq2100
Length=111253
Score = 122 bits (134), Expect = 8e-23
Identities = 146/196 (74%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
|| ||||| ||||| ||||| || |||||||| | || || ||||||||||| || ||
Sbjct 23196 TCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 23255
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791
||||| | ||| ||||| | ||| | || |||||| ||| |||||| ||| |||
Sbjct 23256 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCCTT----GAC 23311
Query 41792 G-ACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847
| | || |||||||| | |||||||||| || || ||||| || || || |||||
Sbjct 23312 GTTCTCAATGGTGTCGCTGGGTTCCACCTCCAGGGTGATGGTTTTGCCAGTGAGGGTCTT 23371
Query 41848 TACGAAAATCTGCATG 41863
||||| |||||||||
Sbjct 23372 GACGAAGATCTGCATG 23387
Score = 116 bits (128), Expect = 3e-21
Identities = 162/225 (72%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || || || || ||| || || || || || ||||| || ||||||||
Sbjct 23625 AGACGGAGAACAAGGTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGG 23684
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || |||||||| || || || ||||| | ||| ||||| | ||| | || ||||
Sbjct 23685 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 23744
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGA-CACA---GTGTCGCTCGACTCCACCTCCAC 41820
|| ||| |||||| ||| |||| | || |||||||| | |||||||||||
Sbjct 23745 TTATCCTGGATTTTGGCCTT----GACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAG 23800
Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || ||||| || || || ||||| || || |||||||||||
Sbjct 23801 GGTGATGGTTTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGTT 23845
>seq722
Length=280156
Score = 105 bits (116), Expect = 6e-18
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
|| || | |||||| || || ||| ||||||||| || || ||||| || ||||||||
Sbjct 192171 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGACAGGGTGCGG 192112
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||| || || || || || || | ||| ||||| | |||| || ||
Sbjct 192111 CCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCT 192052
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGT 41823
|| ||| ||| | ||||| | ||| || | | || || | ||||||||||| ||
Sbjct 192051 TTATCC-TGAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGT 191993
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || || || || || || |||||||||||||| ||
Sbjct 191992 GATGGTCTTCCCAGTGAGGGTTTTCACGAAAATCTGCATCTT 191951
Score = 105 bits (116), Expect = 6e-18
Identities = 152/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
|||||| || || ||| ||||||||| ||||| ||||| || |||||||| | || ||
Sbjct 192391 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTTTAGTCCGACAGGGTGCGGCCATCTTC 192332
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||| || || || || || || | ||| ||||| | |||| | || || ||| |
Sbjct 192331 CAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGTCTTCTTTATCC-T 192273
Query 41773 GATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831
|| | ||||| | ||| || | | || || | ||||||||||| || || || |
Sbjct 192272 GAATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATAGTCT 192213
Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || || || || || |||||||||||||||
Sbjct 192212 TCCCAGTGAGGGTTTTCACGAAAATCTGCATG 192181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462200050945600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |