Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq378 266 2e-66
seq703 102 6e-17
>seq378
Length=373364
Score = 266 bits (294), Expect = 2e-66
Identities = 598/878 (68%), Gaps = 24/878 (3%)
Strand=Plus/Minus
Query 107694 AGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAA 107753
||| | || |||||| | || |||||||| ||||| |||||| |||| |||||||| ||
Sbjct 252151 AGTGAGGAGGAGCTAAATTTTCCCATTGCATACTCCATGGTGATCCACGAGAAGATAGAG 252092
Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813
| |||||||| || || ||| | | ||||| || |||||||| ||||| ||||| |
Sbjct 252091 ATGTTTGAACGACTCCTACGATCTATTTATGCTCCGCAGAACATCTACTGCGTCCATATT 252032
Query 107814 GATGTGAAGTCCCCAGAGACTTT-CAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCC 107872
|| |||||| | | |||| || || ||| || |||| || |||||||||| ||
Sbjct 252031 GACCAGAAGTCTTCCCTGTCTTTTCACAG-GGCTGTGAAGGAAATAGTTTCCTGCTTTCC 251973
Query 107873 CAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCA 107932
|||||| || | |||||||| || | || || ||||| || ||||||||||||||
Sbjct 251972 CAATGTTTTTGTAGCCAGTAAATTAGAAAGTGTTGTGTATGCTTCATGGTCCAGAGTGCA 251913
Query 107933 AGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTC---AGTGCCATGGAAGTACTT 107989
|| || |||||||| ||| |||| |||| || ||| ||| | ||||| ||| |
Sbjct 251912 GGCAGATCTGAACTGCATGAAAGATCTGCTGCA---CTCTGAAGTTCGGTGGAAATACCT 251856
Query 107990 ACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCT 108049
||||||| || ||||||||||| ||||| || |||||| |||||||| |||| ||
Sbjct 251855 TTTGAATACCTGTGGGACAGACTTTCCCATCAAAACCAATAGGGAGATGGTGATGGCTCT 251796
Query 108050 CAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaa 108109
|| | | || || | |||||| ||||| |||| || | || ||||| |||
Sbjct 251795 GAAAGTCCTCAATGGGAGGAACAGCATGGAAACTGAAGTCACCAGTGTCTCCAAGAAAGG 251736
Query 108110 TCGCTGGAAATACCGCTATGAGGT-GACAGACACACTGT-ACCCTACCAG-CAAGATGAA 108166
||||||| | |||| | | | || | || || || | | | | | | || |||
Sbjct 251735 TCGCTGGCAGTACCACCACAATGTCGCCA---ACGGCGTCATCAGAACGGACGTGA-GAA 251680
Query 108167 GGACCCTCCCCCTGATAATTTACCC-ATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225
| || || | || | | ||| |||||| |||| || ||||| ||||||| ||||
Sbjct 251679 AAAGCCCACCGCCCATCAGTAGCCCAATGTTCTCAGGAAACGCCTACTTTGTGGTCTCTA 251620
Query 108226 GAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCA 108285
| |||||||| || | || | | ||| | || | | | | ||||||| |
Sbjct 251619 GGGCCTTTGTGAAATACGTGATGCAGAACGGAGAGGTTCAGAAATTCATGGAATGGGAAA 251560
Query 108286 AAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGAT 108343
||||||| || || || ||||||||| | ||||||||||| ||| | || ||| | | |
Sbjct 251559 AAGACACATACAGTCCAGACGAACACATGTGGGCCACCCTGCAGAGGATG-TCC-TCGGT 251502
Query 108344 GCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAG 108403
||||| || || || ||| ||| ||| || ||||||| || ||||| |
Sbjct 251501 TCCTGGATCAACGCCCCCAAACGGCAAATATGACACATCGGACATGATGGCTCTCGCCCG 251442
Query 108404 -GCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCT 108462
||| ||||||||| || ||||| || | | || || || || || |
Sbjct 251441 AGCT-GTCAAGTGGTCTTATTTAACAGGAGACGTGAAAAAAGGAGCTCCGTACTATCCAT 251383
Query 108463 GCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTC 108522
| || | | | |||| ||| | || | ||||| ||||| ||||| ||| | |
Sbjct 251382 GTATGGGGACCTACAGGAGAGCCGTGTGTGTGTACGGCGCCGGCGACCTCCTGTGGCTCC 251323
Query 108523 TCCAGA-ACCATCACCTCTTGGCAAACAAGTTTGACCC 108559
| ||| | || |||||||| ||||| |||||||||||
Sbjct 251322 T-GAGACAGCAGCACCTCTTTGCAAATAAGTTTGACCC 251286
>seq703
Length=475644
Score = 102 bits (112), Expect = 6e-17
Identities = 191/278 (69%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 107754 AACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTG 107813
||||||||||| ||||| |||||| | ||||| ||||||||||| || ||| | || |||
Sbjct 169089 AACTTTGAACGACTGCTACGAGCCATCTATGCACCTCAGAACATTTATTGTATTCATGTG 169148
Query 107814 GATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCC 107873
|| || |||| || | |||| || | | ||| | ||||| ||||||
Sbjct 169149 GACAAAAAATCCCAGCCCTCTGTAAAAGCTGCCATTACCAGCATCGTGTCCTGTTTCCCC 169208
Query 107874 AATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAA 107933
||||||||||||| | | || || |||||||| || ||| | | || |||
Sbjct 169209 AATGTCTTCATGGTCGGACAGGCTGTGAGTGTGGTTTACGCTGGGTGGCCTCGTGTCCAA 169268
Query 107934 GCTGACCTGAACTGTATGGAAGACTTGCTCCA-GAGCTCAGTGC--CATGGAAGTACTTA 107990
|||||||| ||||| |||| ||| ||| | || | |||||| ||||| |||||
Sbjct 169269 GCTGACCTCAACTGCATGGCTGAC---CTCTATGAACGCAGTGCAGAGTGGAAATACTTC 169325
Query 107991 CTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028
| || || || ||||||||| |||| |||||
Sbjct 169326 ATCAACCTCTGTGGACAAGACTTCCCTCTAAAAACCAA 169363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348191952856770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |