Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq406 154 3e-32 >seq406 Length=364117 Score = 154 bits (170), Expect = 3e-32 Identities = 639/1002 (64%), Gaps = 36/1002 (4%) Strand=Plus/Plus Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496 || |||||| | || ||| | ||||| |||||| | | |||||| ||||||| || Sbjct 265997 GATGGGCGCCAGGAGCGCGTCATGTTCGATAAAATCACCTCCCGCATCCAGAAGCTTTGC 266056 Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556 || || ||| | || |||| || |||| | ||| || ||| || || |||| Sbjct 266057 TACGGCCTGAACCCGGACTTTGTGGATCCAGCTCAGATCACCATGAAGGTGATCCAGGGC 266116 Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616 | |||| ||| || || || || || ||||| |||| ||||||| ||||| | Sbjct 266117 TTGTACAGCGGCGTCACCACCGTGGAGCTTGACACGCTAGCGGCGGAGATCGCGGCCACC 266176 Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTT 248676 || ||| ||||||||||||| | | ||||||| |||||| |||||||| | || Sbjct 266177 CTGACGACCAAACACCCCGACTACGCCATCCTGGCCGCGAGGATTGCCGTCTCCAACCTG 266236 Query 248677 CACAAAGAAACGAAAGAGTCGTTCGTCGAAACCATGGCTGACCTACATGCCTATGGGA-- 248734 ||||| || || || || |||| ||| |||| ||||| ||||| | | Sbjct 266237 CACAAGGAGACCAAGAAGGTGTTCAGCGAGGTGATGGAAGACCTGTTCGCCTACGTCAAC 266296 Query 248735 ----TG-----------GTCGCCGATGACGTCC----ACAC---CGTCAT--TCA-GGAC 248769 || || || |||| ||| | || || ||| ||| ||| Sbjct 266297 CCTCTGAACAAACGCCACTCTCCCATGATCTCCAAGGAGACGCTCGACATCGTCATGGAA 266356 Query 248770 AACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTT 248829 ||| | ||| ||| | | | || |||| || |||||| ||| | ||||| Sbjct 266357 AACAAGGACCGCCTCAATTCCTCCATCATTTACGACAGAGATTTCTCCTACAACTTCTTC 266416 Query 248830 GCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGA 248889 | |||||| || |||||| || || || || || || | || || | | || || Sbjct 266417 GGTTTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATCAACGGGAAAGTGGCCGAGCGG 266476 Query 248890 ATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTG 248949 ||||||||| | ||| | ||| | || ||||| ||| | ||||| || || || Sbjct 266477 CCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATTGA-CGC-TG 266534 Query 248950 C--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCT 249007 | ||||||| |||| | || || ||| | || || ||| | ||||| |||| Sbjct 266535 CCATCGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCCTCT 266594 Query 249008 TCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACG 249067 |||||||||| ||| | |||||| | ||||| || ||||||||| | |||| Sbjct 266595 TCAACGCCGGGACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTTGCCATGAAGGACG 266654 Query 249068 ACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGG 249127 || |||| ||||| || ||||| || || ||| ||| ||||| || | ||| | Sbjct 266655 ACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCGCTG 266714 Query 249128 GCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAA 249187 | || ||||| | | || | ||||||| ||| ||| ||||| || || | Sbjct 266715 GGGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAGCTACATTGCCGGCACCA 266774 Query 249188 ATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCA 249247 | || | | || | || || | || || | | ||| || | | | Sbjct 266775 ACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCTACG 266834 Query 249248 TCAACCAGGCCGGGCGCCGAAAG----GGGTCGTTCGCCATGTATTTGGAAGTGTGGCAC 249303 || |||||| | ||| | | || ||| | || |||||||| ||||| ||||||| Sbjct 266835 TCGACCAGGGC-GGCAACAAGAGACCCGGGGCCTTTGCCATGTACCTGGAACCGTGGCAC 266893 Query 249304 GCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCG 249363 ||| | || || |||||||| |||| ||||||| || || ||| |||||| Sbjct 266894 TTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGAGCC 266953 Query 249364 CGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 | ||||| ||||||| | ||||| || | ||| |||||||| Sbjct 266954 AGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATG 266995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073517318072640