Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq406 419 3e-112
seq541 111 2e-19
>seq406
Length=364117
Score = 419 bits (464), Expect = 3e-112
Identities = 1288/1978 (65%), Gaps = 29/1978 (1%)
Strand=Plus/Minus
Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146
|||||||||||| | ||| || | | | ||||| ||||| || ||||| | |
Sbjct 267979 CTGAATGGATCCGTTGTTTGCGATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCACG 267920
Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206
||| || | | | ||||| || || || || | || || ||||| |||| || ||
Sbjct 267919 CTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCT 267860
Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266
|| ||||| || || ||||| |||| || | ||||| || || |||| || || ||
Sbjct 267859 GCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 267800
Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 65326
|| || || || ||||| || |||| || | || || || | |||| | | |||
Sbjct 267799 GGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGAT 267740
Query 65327 TTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNN 65386
|| || || || | | ||| | ||| || || | ||||
Sbjct 267739 CTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGTGTCTTCTCCCACATGTCGTA 267680
Query 65387 TTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTC 65446
|| || || || || ||| | ||| || | || || ||||| || || || |
Sbjct 267679 CTGGAGGATGCCCTTGCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGC 267620
Query 65447 AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 65506
|| ||||| || || ||||| | || ||| || ||||| |||||||||| | ||
Sbjct 267619 GGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTT 267560
Query 65507 TAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 65566
|| || ||||| |||| || || |||| | || || || || || || |
Sbjct 267559 GAGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAG 267500
Query 65567 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 65626
|| || || || || ||||| || || || | ||| || || | || ||||| || |
Sbjct 267499 ACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGAC 267440
Query 65627 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATC 65686
|| || ||||| || || || || || ||||| ||| | || ||||| ||| ||
Sbjct 267439 CGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGA 267380
Query 65687 CTTCAGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACAGA 65743
||| || || || || ||||| | || ||||||| | || | ||
Sbjct 267379 GGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGGCGTGACGTACATGTTGAGGGCGATGGA 267320
Query 65744 TGCCAGATTACAAACGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAA 65801
||||| || || ||||| ||||| | | | | | || | | | ||| |||||
Sbjct 267319 GGCCAGGTTGCAGACGGCCACCTCGTC--CTTGCTGGTGTACTCCACCACCTCTGTGCAG 267262
Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861
|| || || || |||||||| || | || || || || ||||| |||| || || |||
Sbjct 267261 AGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCC 267202
Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-C 65920
|| || || ||| | || || || ||||| |||| || || || || || | ||||| |
Sbjct 267201 TTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAGAGC 267142
Query 65921 GACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATA--GTGTATACAAT 65978
|| | ||||| | | || ||| ||| | || ||| ||||| | |
Sbjct 267141 TGCT-GCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAGCTT 267083
Query 65979 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAAC 66038
| |||||||| |||||||| | ||||| |||||||| || |||||||||||
Sbjct 267082 C--TCGAACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACACTCGCTGGGACACATCAAG 267025
Query 66039 GACCACTCTCCGTCATCCTT--CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 66095
||||| || || | ||| ||||| ||||| || || || || ||||| | || |
Sbjct 267024 GACCAGTCCTGGT--TGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGT 266967
Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155
| ||| | ||||||| ||| || ||||| |||||||| ||||| || || || |||||
Sbjct 266966 AGAAA-AGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAG 266908
Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215
| | | || | ||||||||||||| ||| ||||| | | || || | |||||
Sbjct 266907 TCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTG 266848
Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275
|| ||||| || | ||| | ||| ||||| || |||||||||| ||| || | | ||
Sbjct 266847 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 266788
Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT 66335
||||| | || ||||| |||| || |||||||| | | || || || | |
Sbjct 266787 TTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGCC 266728
Query 66336 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 66395
| || || ||||| || || || || | ||||| | || | || || ||||||
Sbjct 266727 ACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGATG 266668
Query 66396 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 66455
|| || || || || ||| ||||| ||| || || ||||| |||| || | || |
Sbjct 266667 CCTTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTG 266608
Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515
|| || || || || | ||| ||||| ||||| || ||||| || || || || || |||
Sbjct 266607 GTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTTG 266548
Query 66516 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 66575
|| ||||| || || | ||| || || | || || || || | || | ||| | |
Sbjct 266547 TAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAGC 266488
Query 66576 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 66635
|||||||| || | || | | || ||| || |||| || |||||| |||| |
Sbjct 266487 ATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGA 266428
Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695
|| || ||||| || ||||||| || || |||| |||||||| || || |||||
Sbjct 266427 GTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGGAGGAATTGAGG 266368
Query 66696 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAAT---G 66751
||||| | || | || | || | || | ||| || || || ||||| | |
Sbjct 266367 CGGTCCTTGTTTTCCATGACGATGTCGAGCGT-CTCCTTGGAGATCATGGGAGAGTGGCG 266309
Query 66752 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 66811
||| || ||| ||||| ||| ||| | || |||||||| || || || | ||
Sbjct 266308 TTT---GTTCAGAGGGTTGACGTAGGCGAACAGGTCTTCCATCACCTCGCTGAACACCTT 266252
Query 66812 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGG 66871
|| || || ||||| || || || ||||| || || ||||| | ||||| || || ||
Sbjct 266251 CTTGGTCTCCTTGTGCAGGTTGGAGACGGCAATCCTCGCGGCCAGGATGGCGTAGTCGGG 266192
Query 66872 ATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGT 66931
|||| || || ||||| || || || || || || ||||| | || || || ||
Sbjct 266191 GTGTTTGGTCGTCAGGGTGGCCGCGATCTCCGCCGCTAGCGTGTCAAGCTCCACGGTGGT 266132
Query 66932 TACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATC 66991
|| || | || | || ||||| |||||||| | || | | ||||| | | ||
Sbjct 266131 GACGCCGCTGTACAAGCCCTGGATCACCTTCATGGTGATCTGAGCTGGATCCACAAAGTC 266072
Query 66992 AGTGTTTAAGCCATAACATAATTTTCT-AATACGAGATGTGATTTTATCAAACATGAC 67048
| ||| | ||| || || || |||| || || || ||||||||||| ||||||||
Sbjct 266071 CGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGAC 266015
Score = 93.3 bits (102), Expect = 6e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
|||| ||||| || ||||| || || ||||| || |||| || || || ||||| |
Sbjct 268242 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTCGGCTCAGCGATGTGGATGT 268183
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| || || || || |||||||||||||| | |||||| ||||| | | | ||||
Sbjct 268182 TCAGCGACTGGCTCTGGTCGATGAAGGCTCCACGGTCTGCCGCCATCCTCAGCACGGTCT 268123
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 65074
| || | |||||||||| |||||||| | |||| | || |||||
Sbjct 268122 TCTGGGAGATTTCCCAAACGGTTTTATACAGCTGCTTCAGGTCCTCTGG 268074
>seq541
Length=321934
Score = 111 bits (122), Expect = 2e-19
Identities = 126/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
||||||||||||| ||||| || || |||||| || | || || || || || || |
Sbjct 158005 TCCATCCGTAAAAGTGCATGCTGGTGAGTTTGCCGTAGTTTGGCTCAGCGATGTGAATGT 158064
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| ||||||||| ||||||||| ||| || | ||||| ||||| || | || || |
Sbjct 158065 TCAGAGATTGACTCTGATCGATGTAGGTGCCACGATCTGCTGCCATCTTCAGGACGGTTT 158124
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 65074
| || | |||||||||| |||||||| | |||| | |||||||||
Sbjct 158125 TCTGGGAGATTTCCCAAACTGTTTTATAGAGCTGCTTCAGATCTTCTGG 158173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658023847268200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |