Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq151 163 2e-35 >seq151 Length=596046 Score = 163 bits (180), Expect = 2e-35 Identities = 183/242 (76%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||| ||| ||||||| ||||||||||| ||||| | ||| ||| || || | || ||| Sbjct 516295 CCTCCAAGGAGGACTGCAACATCATCACTGACACAG-CAGCCAAGCTCGAGCGCAGCGGC 516353 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||| || |||| || |||||||| || || ||||| |||||| | | ||| Sbjct 516354 TTCTACTGGGGCCCGCTGGGAGTGGAGGAGGCCCACCGCATGCTCCGCAACGCCCCGCTG 516413 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 ||||||| || || || || ||| |||| ||||||||||| ||||| ||||| |||||| Sbjct 516414 GGCAGCTACCTTATCCGCGACAGCCGGCAGAAGGACGTCTTCTTCACCCTGTCCTATCAC 516473 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTTGGCT 92053 || ||||||||||| ||| | || || |||||| | || | || || |||| Sbjct 516474 GACAAGAAAGGACCCGTCAGCGTGCGCATCGACTACAAGCAGCAGAAGTTCTCTCTGGCC 516533 Query 92054 GG 92055 || Sbjct 516534 GG 516535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356154995386315