Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq619 105 7e-18
seq1594 91.5 1e-13
>seq619
Length=304156
Score = 105 bits (116), Expect = 7e-18
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || || || |||| ||||| |||||||| |||
Sbjct 191786 GTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTGCCA 191727
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| ||||||| | ||||| || ||||| ||||||||||| || ||| | |||| ||
Sbjct 191726 GCAAAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATC-CTGAATCTTTGCCTT 191668
Query 139688 AGCTGTTC-CACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745
| |||| || | ||||| ||||||||||||| | ||| | ||||| || || | |
Sbjct 191667 CAC-GTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTGAGAG 191609
Query 139746 TTTTTACGAATATTTGCAT 139764
|||| ||||| || |||||
Sbjct 191608 TTTTCACGAAAATCTGCAT 191590
>seq1594
Length=294527
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
||||| || | | ||| | ||| | ||| | ||||| ||||| || ||||| ||||||
Sbjct 183801 TGGCCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAATCG 183860
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| |||| || || ||||| || || ||| ||||||| | ||||| || ||
Sbjct 183861 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGG 183920
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| ||||| || || || |||||| || | | || | ||||| |||||||
Sbjct 183921 GGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCA 183980
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || | ||| | ||||||||||| | || || ||||| || |||||
Sbjct 183981 ACTTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 184030
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620
||||| || ||||| || || ||||| || || || |||| ||||| |||||
Sbjct 184055 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 184114
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| ||||||| | ||||| || || || ||||| || || || ||| ||
Sbjct 184115 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATCTT 184174
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|| | | || | |||||| ||||||| ||||| | ||| | |||||||||||
Sbjct 184175 GGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGT 184234
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
| || || ||||| || |||||
Sbjct 184235 GAGGGTCTTGACGAAGATCTGCAT 184258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495951734516000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |