Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq406 439 4e-118
seq768 102 1e-16
seq120 93.3 6e-14
>seq406
Length=364117
Score = 439 bits (486), Expect = 4e-118
Identities = 1302/1981 (66%), Gaps = 35/1981 (2%)
Strand=Plus/Minus
Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025
|||||||||||| | ||| || | | | ||||| ||||| || ||||| | |
Sbjct 267979 CTGAATGGATCCGTTGTTTGCGATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCACG 267920
Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085
||| || | | | ||||| || || || || | || || ||||| |||| || ||
Sbjct 267919 CTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCT 267860
Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145
|| ||||| || || ||||| || | || | || || || || |||| || || ||
Sbjct 267859 GCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 267800
Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205
|| || ||||| ||||| || |||| || | || || || | |||| | |||
Sbjct 267799 GGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGAT 267740
Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGG-GACAACATTCCAAAGATCA 79263
|| || || || || |||| | ||||| || || | ||| | | | | ||| | ||
Sbjct 267739 CTTCTCCTTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGTGTCTTC-TCCCACATGTCG 267682
Query 79264 TATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323
|| || || || || || || | || || ||| || || || || || || |
Sbjct 267681 TACTGGAGGATGCCCTTGCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCT 267622
Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383
|||| | ||| || || ||||| | || ||| || ||||| ||||| |||| |
Sbjct 267621 GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATG 267562
Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443
||||| || ||||| |||| || || |||| | || || || || || ||
Sbjct 267561 TTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCC 267502
Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503
| || || || || || ||||| || || || | ||| || || | || ||||| ||
Sbjct 267501 AGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGG 267442
Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563
| || || ||||| || || || || || ||||| || | || ||||| ||| ||
Sbjct 267441 ACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACG 267382
Query 79564 TCCTTTAGTTTGAGAAAATCAAATCGTCCA-TCTA---TTACAAACATGTTCAACGCGAC 79619
|| || || || || |||| ||| | || ||||||| | ||||
Sbjct 267381 GAGGCCAGCTTCTTGAAGTCGAAA-GTCCGCTCTGGCGTGACGTACATGTTGAGGGCGAT 267323
Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCC--GCATATTGTATTATTTCAGTG 79677
|| ||||| || || ||||| ||||| | | | | | || | | | || |||
Sbjct 267322 GGAGGCCAGGTTGCAGACGGCCACCTCGTC--CTTGCTGGTGTACTCCACCACCTCTGTG 267265
Query 79678 CAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 79737
|||||||| || || || ||||| || | || || || || ||||| |||| || ||
Sbjct 267264 CAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCG 267205
Query 79738 TCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 79797
||||| || || ||| | || || || ||||| |||| || || || || || | ||||
Sbjct 267204 TCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAG 267145
Query 79798 A-CGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATAT 79854
| | || | ||||| | | ||| ||| ||| | || ||| ||||| |
Sbjct 267144 AGCTGCT-GCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAG 267086
Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914
|| |||||||| |||||||| ||||| | |||||||| ||| |||||||||
Sbjct 267085 CTTC--TCGAACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACACTCGCTGGGACACATC 267028
Query 79915 AACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 79972
|| ||||| || | | |||| |||| ||||| || || || || ||||| | |
Sbjct 267027 AAGGACCAGTCCTGGT--TGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGG 266970
Query 79973 C-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 80031
| || ||| || ||||||| ||| |||||||| |||||||| ||||| || || || |||
Sbjct 266969 CGTAGAAA-AGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGG 266911
Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091
|| | | | || | ||||||||||||| ||| ||||| | | || |||| |||
Sbjct 266910 AAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTG 266851
Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151
|| || ||||| || | ||| | ||| ||||| || |||||||||| ||| || | |
Sbjct 266850 TTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAAT 266791
Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 80211
|| ||||| | || ||||| |||| || |||||||| | | || || || |
Sbjct 266790 CCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACC 266731
Query 80212 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 80271
| | || || ||||| || || || || | ||||| | || | || || |||
Sbjct 266730 GCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAG 266671
Query 80272 ATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 80331
||||| || ||||| || || ||||| ||| || || ||||| |||| || | ||
Sbjct 266670 ATGCCTTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGACAGCTGCGGCCGG 266611
Query 80332 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 80391
| || || || || || | ||| ||||| ||||| || ||||| || || ||||| ||
Sbjct 266610 TTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGG 266551
Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451
||||| ||||| || || | || || || | || || || |||| || | |||
Sbjct 266550 TTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATG 266491
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
| ||||||||| || | || | | || || || |||| || ||| || |||
Sbjct 266490 AGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCC 266431
Query 80512 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571
| ||| || ||||| || ||||||| || || |||| |||||||| || || |||
Sbjct 266430 AGAGTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGGAGGAATTG 266371
Query 80572 AGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAAT- 80629
|| ||||| | || | || | || | || | ||| || || || ||||| |
Sbjct 266370 AGGCGGTCCTTGTTTTCCATGACGATGTCGAGCGT-CTCCTTGGAGATCATGGGAGAGTG 266312
Query 80630 --GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 80687
|||| || ||| || || ||| ||| | || |||||||| || || || |
Sbjct 266311 GCGTTT---GTTCAGAGGGTTGACGTAGGCGAACAGGTCTTCCATCACCTCGCTGAACAC 266255
Query 80688 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATC 80747
|| || || |||||||| || || || ||||| || || ||||| | ||||| || ||
Sbjct 266254 CTTCTTGGTCTCCTTGTGCAGGTTGGAGACGGCAATCCTCGCGGCCAGGATGGCGTAGTC 266195
Query 80748 TGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 80807
|| |||| || || ||||| || || || || || || ||||| | || || ||
Sbjct 266194 GGGGTGTTTGGTCGTCAGGGTGGCCGCGATCTCCGCCGCTAGCGTGTCAAGCTCCACGGT 266135
Query 80808 TGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATG 80867
|| || || | || | || ||||| |||||||| | || | | ||||| | |
Sbjct 266134 GGTGACGCCGCTGTACAAGCCCTGGATCACCTTCATGGTGATCTGAGCTGGATCCACAAA 266075
Query 80868 ATCAGTGTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATGA 80926
|| | ||| | ||| || || || |||| || || || ||||||||||| |||||||
Sbjct 266074 GTCCGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGA 266016
Query 80927 C 80927
|
Sbjct 266015 C 266015
Score = 98.7 bits (108), Expect = 1e-15
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844
|||| |||||||| ||||| || || ||||| || |||| || || || ||||| |
Sbjct 268242 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTCGGCTCAGCGATGTGGATGT 268183
Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904
||| || || || || |||||||||||||| | |||||| ||||| | | | ||||
Sbjct 268182 TCAGCGACTGGCTCTGGTCGATGAAGGCTCCACGGTCTGCCGCCATCCTCAGCACGGTCT 268123
Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 78953
| || | |||||||||| |||||||| | |||| | || |||||
Sbjct 268122 TCTGGGAGATTTCCCAAACGGTTTTATACAGCTGCTTCAGGTCCTCTGG 268074
>seq768
Length=308456
Score = 102 bits (112), Expect = 1e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
||||||||| ||| || || |||||| || || || || ||||| ||||| | ||| |
Sbjct 127963 CCTCGTCTCGACTGATGAGCTCGTTGCTGAAGGTCAGGCCAGGCATCAGGCCTCTCTTCT 127904
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || |||| || || || ||||| ||||||||||| || || || || ||||
Sbjct 127903 TCAGCCAGAAGATGGCGGCGAACGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 127844
Query 50102 CAACAAGTCTCTCTCC 50117
| || | |||||||||
Sbjct 127843 CCACCACTCTCTCTCC 127828
>seq120
Length=551038
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
||||||| || ||||| ||||||||||| | || || || ||||| ||||| | ||| |
Sbjct 520407 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 520348
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| | || | || ||||| || || |||||||| || || ||||| || || |
Sbjct 520347 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 520288
Query 50102 CAACAAGTCTCTCTCC 50117
| ||||| | ||| ||
Sbjct 520287 CCACAAGACGCTCCCC 520272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718106246792200
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