Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq768 105 1e-17
seq406 105 1e-17
>seq768
Length=308456
Score = 105 bits (116), Expect = 1e-17
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
|| ||| ||||||| ||||| ||||| ||||| |||||||| || ||| || || |||
Sbjct 127831 GAGAGAGTGGTGGCCTTCGCTGCCGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCCGCC 127890
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||| |||||| | || || ||||| || ||||| ||| |||||| | ||
Sbjct 127891 ATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCTGGCCTGACCTTCAGCAACGAGCTCATC 127950
Query 125541 TCTCGAGACGAGG 125553
|||||||||||
Sbjct 127951 AGTCGAGACGAGG 127963
>seq406
Length=364117
Score = 105 bits (116), Expect = 1e-17
Identities = 363/562 (65%), Gaps = 22/562 (4%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||||||| ||| || | || || ||||| ||| | ||||| | | | ||
Sbjct 266771 ACCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGC 266830
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| ||||||||||| || | || || || | ||| | ||| ||||||| |||
Sbjct 266831 TACGTCGACCAGGGCGGCAACAAGAGACCCGGGGCCTTTGCCATGTACCTGGAACCGTGG 266890
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||| ||||| || ||||| | ||| || || ||| | || || ||| ||
Sbjct 266891 CACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGA 266950
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040
||||| ||| | || || || | ||| | || || ||||||||||| | || |
Sbjct 266951 GCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATGAAGAGAGTGGAAAGC 267010
Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100
||| | | ||||| | | ||||| ||| | || || || ||| ||| |||
Sbjct 267011 AACCAGG------ACTGGTCCTTGATGTGTCCCAGCGAGTGTCCTGGGCTGGACGAGTGC 267064
Query 97101 TGGGGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAG-AGGGCCGAT-ACG 97155
||||| || ||||| ||| ||| ||||| || ||| | | |||| | | | |
Sbjct 267065 TGGGGAGAGGAGTTCGAG---AAGCTCTACACCAGATATGAGAAGGAAGGGAGGGTGAAG 267121
Query 97156 TGAGACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTG 97215
| | | | | ||| || || ||| | |||||| | | | ||| || || |
Sbjct 267122 AGGGTGGTGAAGGCGCAGCAG--CTCTGGTACGCCATCATCGAGTCCCAGACCGAAACCG 267179
Query 97216 GAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGG 97275
| || || ||||| ||||||||||| | || | || |||||||| | || |||
Sbjct 267180 GGACGCCCTACATGCTCTACAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAACCTGG 267239
Query 97276 GCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGA 97335
|||||||||| || ||| || ||||| || | || |||||| || |||||||
Sbjct 267240 GCACCATCAAATGCAGCAACCTCTGCACAGAGGTGGTGGAGTACACCAGCAAGGACGAGG 267299
Query 97336 CGGCAGTTTGCGTTCTGGCATC 97357
||| || ||| ||||| ||
Sbjct 267300 TGGCCGTCTGCAACCTGGCCTC 267321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740891489039800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |