Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq157 118 7e-22
>seq157
Length=512728
Score = 118 bits (130), Expect = 7e-22
Identities = 127/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
||||||| |||||||||| || || | |||||| ||||| || ||||| ||||| || ||
Sbjct 347327 CATGTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATC 347268
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892
|| || ||||| | |||||| || |||| ||||| | ||| || ||||| ||
Sbjct 347267 CCCCTCCTCCCTCTCTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCATC 347208
Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
||||||||| || || ||||| || ||||| |||| ||||| || ||
Sbjct 347207 CCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGGCATTTGTTGATCC 347160
Score = 104 bits (114), Expect = 2e-17
Identities = 121/162 (75%), Gaps = 1/162 (1%)
Strand=Plus/Minus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| || |||| || || |||||||| ||||| || ||||||||||||||| || ||
Sbjct 348227 AGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAAAGGC 348168
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| || | ||||||| | | || | |||||| |||||||| || ||||| ||||||
Sbjct 348167 ACGCCCAGACCCATGT-CGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTCGCA 348109
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652
||||| |||||||| | || || ||| || || || || ||
Sbjct 348108 GACGTAGAACTGACAGAGGGCGTGGCAGGGGGGCAGCGCCAT 348067
Score = 82.4 bits (90), Expect = 5e-11
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 25422 TTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCT 25481
||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 348377 TTCAGAGGTTCGATGTGATTGAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAAGTCA 348318
Query 25482 CCCGG 25486
|| ||
Sbjct 348317 CCGGG 348313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340062547044165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |