Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1594 105 6e-18
>seq1594
Length=294527
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || ||||||| | ||||| ||| | |
Sbjct 184030 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 183971
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || ||| | ||| |||||| || || || || || || ||||||||
Sbjct 183970 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 183911
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||||||||| || | || |||| |||||| || |||||||||
Sbjct 183910 CAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGATTACAAC 183851
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || |||||||| || || ||
Sbjct 183850 ATCCAGAAAGAATCTACCCTCCA 183828
Score = 105 bits (116), Expect = 6e-18
Identities = 159/224 (71%), Gaps = 8/224 (4%)
Strand=Plus/Minus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || ||||| ||||| | ||||| ||| ||||||| | || ||||
Sbjct 184494 ACGCAAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGG 184435
Query 25051 AGTCGTCTGACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATT 25106
| | ||||| || ||| ||| |||| |||| || || || || || ||
Sbjct 184434 AACCCAGCGACACCATTGAGAACGTCA---AAGCCAAAATCCAG-GATAAGGAGGGCATC 184379
Query 25107 CCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTG 25166
|| |||||||| ||| || | || |||||||| || || | ||||||| ||||| ||
Sbjct 184378 CCCCCTGACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTG 184319
Query 25167 GGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| |||||||| |||||||||||||| || ||| | || ||
Sbjct 184318 TCTGACTACAATATCCAAAAAGAATCCACCCTCCATCTTGTCCT 184275
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || | ||||| ||| ||||||| | || |||||| | |
Sbjct 188450 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAAACCATCACCCTTGAGGTGGAGCCCAGT 188391
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || ||| | ||| || ||| || || || || || || ||||||||
Sbjct 188390 GACACCATTGAGAATGTTAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 188331
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || |||||||| || || | ||||||| ||||| || || |||||
Sbjct 188330 CAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 188271
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||||||||| || ||
Sbjct 188270 ATCCAGAAAGAATCCACACTCCA 188248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433232384145575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |