Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq406 641 7e-179
seq541 113 9e-20
seq768 105 1e-17
seq120 100 5e-16
>seq406
Length=364117
Score = 641 bits (710), Expect = 7e-179
Identities = 1114/1600 (70%), Gaps = 56/1600 (4%)
Strand=Plus/Minus
Query 244010 GAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCC 244069
|| || |||| |||| |||| | | ||| | |||||||||||||| ||||||
Sbjct 267972 GATCCGTTGTTTGCGATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCA---CGCTCC 267916
Query 244070 ---AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGC 244126
|| ||| || ||||| ||| || | ||| |||||||| |||||||| | |||
Sbjct 267915 GTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGG 267856
Query 244127 TGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTG 244186
||||| ||||||| || || ||||||| ||| |||||||||| ||||| || |||
Sbjct 267855 GTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTG 267796
Query 244187 CTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGG 244246
||| || |||||||||| || |||||| ||||||||||||||||| | |||
Sbjct 267795 GACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTC 267736
Query 244247 AGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATG 244306
| ||| ||||||||||||| | | | ||| || | ||||||||
Sbjct 267735 TCCTTCAGCAGCTTCCAGTCCCACAGGTCGG--------TCG-GTGTCTTCTCCCACATG 267685
Query 244307 TCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCG 244366
|| |||| || | |||||||||| ||| ||||||||| ||| |||||| ||| |
Sbjct 267684 TCGTACTGGAGGATGCCCTTGCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGA-G 267626
Query 244367 CGCTG-GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCAT 244425
| ||| ||| || | ||||| | || |||||||||| |||||||||||||||||||
Sbjct 267625 CTCTGCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTG 267566
Query 244426 CTTGTTCATGTCGCGGGCCTT-GCCGCAGGTGAAGGGGATGCC-CATCATCATGAAGACG 244483
|||| | | || || ||| | || ||| || ||| | ||||| |||||| |
Sbjct 267565 GATGTTGA-GCAGCTGGGCTTCGGGGCTTTCGAACGG-ATGTCGCATCAGGATGAAGGCA 267508
Query 244484 TCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCT 244543
|||||||| ||||| |||||||| ||||| || ||||| ||||||||||| | ||||
Sbjct 267507 TCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCT 267448
Query 244544 TCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGG 244603
||||| || ||||| | ||| |||||| | |||||||||||| ||| | |
Sbjct 267447 TCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTG 267388
Query 244604 ACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTC 244663
|||| ||||||| || |||||| | || || || ||| | |
Sbjct 267387 GTGACGGAGGCCAGCTTCTTGAAGTCGAA-----AG------TCCGCTCTGGCG----TG 267343
Query 244664 ACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTG 244723
|| || ||||||||||| | |||||||||||||||||||||||| ||| | |||||
Sbjct 267342 ACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTG 267283
Query 244724 TACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTG 244783
|||| || | ||| ||||||||||| ||||| |||||||||||||||| ||| || |||
Sbjct 267282 TACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTG 267223
Query 244784 GACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCG 244843
||| |||||| |||||||||||||||||| ||||| |||||| ||| |||||
Sbjct 267222 CTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGAC 267163
Query 244844 ACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCC 244903
||| || | || |||||| | | ||||| ||| ||| || | || || |
Sbjct 267162 TCGATGATGGCGTACCAGAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTC 267103
Query 244904 TCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCAC 244963
|| || | |||||| || ||||||||| |||||| |||||| || || || |||
Sbjct 267102 TCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACAC 267043
Query 244964 GACGCCGGG-CACATGAGACTCCA---CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAG 245019
||| ||| ||||| | ||| || | || ||| || |||| |||||| ||
Sbjct 267042 -TCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTTTCC---ACTCTCTTCATGAACAG 266987
Query 245020 GTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTT 245079
||| |||||||| | ||| | ||| ||||| |||| |||||||| ||| || |||||
Sbjct 266986 GTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTT 266927
Query 245080 CTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAG 245139
|||| ||||||||| ||||| || ||||||| |||||| || |||| ||| | || |
Sbjct 266926 CTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAA 266867
Query 245140 GGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGA 245195
||| ||||| | ||||||||| |||||||| | | | ||||| |||| | |
Sbjct 266866 GGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGA----CGTAGCGAGCCGTGTTGTTGTAAA 266811
Query 245196 TGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT 245255
| ||| | || || | ||||| |||| |||||||||||| |||||| |||
Sbjct 266810 CTCTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCCCG 266751
Query 245256 TGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGC 245315
| | || | ||| | | || ||| | || || ||| |||||| ||||| ||||
Sbjct 266750 TCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGC 266691
Query 245316 AGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGC 245375
| ||| | |||||| ||||| || |||||||| ||||||| ||||| ||||
Sbjct 266690 ACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGC 266631
Query 245376 AGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAA 245435
|| ||||||||| ||| | | | | | |||||| || || || ||||||||| |
Sbjct 266630 AGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGA 266571
Query 245436 AGTAGCGGCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCG-CCGTG 245493
| | | || ||| |||| ||| |||| || |||||| ||| | ||| |||||
Sbjct 266570 ACCA-CTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATG-TCTCGCCCGTG 266513
Query 245494 GATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCC 245553
|||| | | ||||||||| ||||||| ||| |||| | | ||
Sbjct 266512 GATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGAT 266453
Query 245554 CTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAG 245593
||| |||| |||||||||||| || |||||||| || |||
Sbjct 266452 CTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAAG 266413
>seq541
Length=321934
Score = 113 bits (124), Expect = 9e-20
Identities = 132/176 (75%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 244705 CACCTCCTC-CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763
|||||| || | | ||| |||| | ||| ||||| |||||||| || ||| |||||||||
Sbjct 160830 CACCTCATCTCTACTTG-TGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGG 160888
Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823
||||||| | || || |||| ||| ||||||||||||||||||||||||| | |||
Sbjct 160889 TGCCCAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCG 160948
Query 244824 CCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879
|| ||||| ||| | ||| || | || |||||| | | |||||| |||
Sbjct 160949 TACCCGTCTCTGTCTGCGACTCGATGATGGCGTACCAGAGCTGCTGAGCCTTCACC 161004
Score = 111 bits (122), Expect = 3e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067
|| ||| |||||||| || ||||| | ||| ||| ||||| |||| |||||||| ||
Sbjct 161314 CTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTCTCTGCTCTTC 161373
Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127
|| ||||||||| ||||||||||||| ||||| ||||| | ||||| |||||||
Sbjct 161374 TTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCCACGGCTCCAG 161433
Query 245128 GTAGACAGCGAGGGCGCCGGG 245148
||| |||| || ||| || ||
Sbjct 161434 GTACACAGAGAAGGCCCCTGG 161454
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
|||||||||||||| || ||||| | ||| ||| | |||||| || || ||| |||
Sbjct 159202 ACCTGAAACTCTCCTGAGAGCACCCTGCGAGTGTAAAAGTTGCTTGTGTACGCCTCAATG 159261
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
||| |||| ||||| ||||| || ||| || || ||||| || | || ||||||
Sbjct 159262 GACTCATTGTTACCCAGGATCTGGGCAGTGGAAGCTGTGGGCATCGGGGCCAAAAGCAGA 159321
Query 244217 CTGTTCCTCACGCCGTGCCT 244236
|||||||| || ||||||||
Sbjct 159322 CTGTTCCTTACACCGTGCCT 159341
>seq768
Length=308456
Score = 105 bits (116), Expect = 1e-17
Identities = 107/137 (78%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||||| |||| ||||| | ||||| ||||| ||||||||||| || | ||||||
Sbjct 127828 GGAGAGAGAGTGGTGGCCTTCGCTGCCGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCC 127887
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
||||||||||||| ||| ||| ||| | |||||| || || |||||| ||||| ||
Sbjct 127888 GCCATCTTCTGGCTGAAGAAGAGAGGCCT-GATGCCTGGCCTGACCTTCAGCAACGAGCT 127946
Query 42815 CATCAGCAGGGACGAGG 42831
|||||| | |||||||
Sbjct 127947 CATCAGTCGAGACGAGG 127963
Score = 84.2 bits (92), Expect = 4e-11
Identities = 95/126 (75%), Gaps = 6/126 (5%)
Strand=Plus/Plus
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| | | ||||||||| ||||| | || ||||||||||||||||| |||||
Sbjct 127459 TTCACGCAGGAGGTGCAGGTGACAGAGGCCAGGTGTTTCTACGGCTTCCAGATCGCCATG 127518
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCC 42593
|||||| | ||||||||| |||| || ||||||| |||| |||||| |||||||
Sbjct 127519 GAGAACATCCACTCTGAGATGTA---CAGCCTGCTCATCGACACCTACATCAAGGATCCC 127575
Query 42594 GTCGAG 42599
||||
Sbjct 127576 AGCGAG 127581
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
||| |||||||| ||||||||||| || ||||||| ||||||||||| || ||||||||
Sbjct 128751 CCCGTTCGACTTCATGGAGAACATTTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAGCG 128810
Query 43130 CGTCGCCGACTACCAG 43145
|||| || ||||||
Sbjct 128811 GGTCGGGGAGTACCAG 128826
>seq120
Length=551038
Score = 100 bits (110), Expect = 5e-16
Identities = 106/137 (77%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| ||| | || || || || | || || ||||| ||||||||||| ||| | |||||
Sbjct 520272 GGGGAGCGTCTTGTGGCTTTCGCAGCAGTGGAGGGGATCTTCTTCTCAGGCTCATTCGCT 520331
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
| |||| |||||| ||| ||| ||| || ||||| || || |||| ||| ||||||||
Sbjct 520332 GCTATCTACTGGCTGAAGAAGAGAGGCCTC-ATGCCAGGCCTTACCTACTCCAACGAACT 520390
Query 42815 CATCAGCAGGGACGAGG 42831
||| |||||||||||||
Sbjct 520391 CATTAGCAGGGACGAGG 520407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944125484234800
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